OOIR: Observatory of International Research

Papers

(The H4-Index of Genome Biology and Evolution is 27. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-10-01 to 2025-10-01.)

Article	Citations
Mitonuclear Coevolution in Bumblebees (Bombus): Genomic Signatures and Its Role in Climatic Niche Adaptation	119
Ohnologs and SSD Paralogs Differ in Genomic and Expression Features Related to Dosage Constraints	111
OrthoPhy: A Program to Construct Ortholog Data Sets Using Taxonomic Information	68
Genome Evolution and Introgression in the New Zealand mud Snails Potamopyrgus estuarinus and Potamopyrgus kaitunuparaoa	57
“Correcting” Gene Trees to be More Like Species Trees Frequently Increases Topological Error	51
Palaeognaths Reveal Evolutionary Ancestry of the Avian Major Histocompatibility Complex Class II	49
Population Genomics of Japanese Macaques (Macaca fuscata): Insights Into Deep Population Divergence and Multiple Merging Histories	44
Impact of Phylogenetic Method Choice on Indel Analyses in HIV-1 Subtype B	44
A Simulation Framework for Modeling the Within-Patient Evolutionary Dynamics of SARS-CoV-2	42
High Polymorphism Levels of De Novo ORFs in a Yoruba Human Population	41
Genomic Resources and Annotations for a Colonial Ascidian, the Light-Bulb Sea Squirt Clavelina lepadiformis	40
Genealogical Analyses of 3 Cultivated and 1 Wild Specimen of Vitis vinifera from Greece	40
Filtration of Gene Trees From 9,000 Exons, Introns, and UCEs Disentangles Conflicting Phylogenomic Relationships in Tree Frogs (Hylidae)	36
Evolution of Plant Conserved microRNAs After Whole-Genome Duplications	36
Myxozoans (Cnidaria) do not Retain Key Oxygen-Sensing and Homeostasis Toolkit Genes	34
Correction to: Genome-Scale Data Reveal Deep Lineage Divergence and a Complex Demographic History in the Texas Horned Lizard (Phrynosoma cornutum) throughout the Southwestern and Central United	34
Multiple Domestication Centers of the Indian Pig Population	33
Nuclear and Mitochondrial Genome Assemblies for the Endangered Wood-Decaying Fungus Somion occarium	33
Highlight: Gene Cluster Reshuffling Drives Natural Sunscreen Evolution in Lichens	33
Genetic Analysis of Mingrelians Reveals Long-Term Continuity of Populations in Western Georgia (Caucasus)	32
Discovery of New Genomic Configuration of Mating-Type Loci in the Largest Lineage of Lichen-Forming Fungi	30
Does Effective Population Size Govern Evolutionary Differences in Telomere Length?	29
Egg Yolk Protein Homologs Identified in Live-Bearing Sharks: Co-Opted in the Lecithotrophy-to-Matrotrophy Shift?	29
The Nitroplast and Its Relatives Support a Universal Model of Features Predicting Gene Retention in Endosymbiont and Organelle Genomes	29
Whole-Genome Sequences of Two Kazachstania barnettii Strains Isolated from Anthropic Environments	29

Divergence in theSaccharomycesSpecies’ Heat Shock Response Is Indicative of Their Thermal Tolerance	28
Comprehensive Phylogenomics of Methylobacterium Reveals Four Evolutionary Distinct Groups and Underappreciated Phyllosphere Diversity	27
Exploring the Natural Origins of SARS-CoV-2 in the Light of Recombination	27
Cis-regulatory Variation in Relation to Sex and Sexual Dimorphism in Drosophila melanogaster	27