Mobile DNA

Papers
(The median citation count of Mobile DNA is 1. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-10-01 to 2025-10-01.)
ArticleCitations
Recurrent co-domestication of PIF/Harbinger transposable element proteins in insects103
Subcellular location of L1 retrotransposon-encoded ORF1p, reverse transcription products, and DNA sensors in lupus granulocytes84
Whole-genome analysis reveals the contribution of non-coding de novo transposon insertions to autism spectrum disorder38
Generalized nuclear localization of retroelement transcripts27
SCIFER: approach for analysis of LINE-1 mRNA expression in single cells at a single locus resolution25
An intronic LINE-1 regulates IFNAR1 expression in human immune cells24
Look4LTRs: a Long terminal repeat retrotransposon detection tool capable of cross species studies and discovering recently nested repeats23
Long-read sequencing improves the genetic diagnosis of retinitis pigmentosa by identifying an Alu retrotransposon insertion in the EYS gene22
Correction: A beginner’s guide to manual curation of transposable elements15
Multiple horizontal transfer events of a DNA transposon into turtles, fishes, and a frog15
Association of a 7.9 kb Endogenous Retrovirus Insertion in Intron 1 of CD36 with Obesity and Fat Measurements in Sheep15
SINE-derived satellites in scaled reptiles13
Characterization of transposable elements within the Bemisia tabaci species complex13
Chromosomal integration of Tn5253 occurs downstream of a conserved 11-bp sequence of the rbgA gene in Streptococcus pneumoniae and in all the other known hosts of this integrative conjugative element 12
A comparative analysis of L1 retrotransposition activities in human genomes suggests an ongoing increase in L1 number despite an evolutionary trend towards lower activity12
THE1B may have no role in human pregnancy due to ZNF430-mediated silencing12
Insertion of short L1 sequences generates inter-strain histone acetylation differences in the mouse11
Plants acquired mitochondrial linear plasmids horizontally from fungi likely during the conquest of land11
Correction: Characterization of transposable elements within the Bemisia tabaci species complex10
Mobile group I introns at nuclear rDNA position L2066 harbor sense and antisense homing endonuclease genes intervened by spliceosomal introns9
Analysis of pericentromere composition and structure elucidated the history of the Hieracium alpinum L. genome, revealing waves of transposable elements insertions9
Binding of NF-Y to transposable elements in mouse and human cells8
Association of hyperactivated transposon expression with exacerbated immune activation in systemic lupus erythematosus8
Pan cancer characterization of genes whose expression has been associated with LINE-1 antisense promoter activity8
TE Density: a tool to investigate the biology of transposable elements7
RNA sensor MDA5 suppresses LINE-1 retrotransposition by regulating the promoter activity of LINE-1 5′-UTR7
Impact of a horizontally transferred Helitron family on genome evolution in Xenopus laevis7
Double-stranded DNA viruses may serve as vectors for horizontal transfer of intron-generating transposons7
RepEnTools: an automated repeat enrichment analysis package for ChIP-seq data reveals hUHRF1 Tandem-Tudor domain enrichment in young repeats7
Internal initiation of reverse transcription in a Penelope-like retrotransposon6
Retand LTR-retrotransposons in plants: a long way from pol to 3’LTR6
Co-option of an endogenous retrovirus (LTR7-HERVH) in early human embryogenesis: becoming useful and going unnoticed6
Exploration of the regulatory relationship between KRAB-Zfp clusters and their target transposable elements via a gene editing strategy at the cluster specific linker-associated sequences by CRISPR-Ca6
The fifth Japanese meeting on biological function and evolution through interactions between hosts and transposable elements6
FishPi: a bioinformatic prediction tool to link piRNA and transposable elements6
A plan or pandemonium? The conundrum of retrotransposon activation in cancer6
Multiple horizontal transfers of a Helitron transposon associated with a parasitoid wasp6
Comparative genomic and transcriptomic analyses of transposable elements in polychaetous annelids highlight LTR retrotransposon diversity and evolution6
Host range of strand-biased circularizing integrative elements: a new class of mobile DNA elements nesting in Gammaproteobacteria5
The role of Smarcad1 in retroviral repression in mouse embryonic stem cells5
A unique eukaryotic lineage of composite-like DNA transposons encoding a DDD/E transposase and a His-Me finger homing endonuclease5
Analysis of antibiotic resistance gene cassettes in a newly identified Salmonella enterica serovar Gallinarum strain in Korea5
Migrators within migrators: exploring transposable element dynamics in the monarch butterfly, Danaus plexippus5
Identification of transposable element families from pangenome polymorphisms5
A proteomic screen of Ty1 integrase partners identifies the protein kinase CK2 as a regulator of Ty1 retrotransposition4
Differential regulation of transposable elements (TEs) during the murine submandibular gland development4
Eco-evolutionary significance of domesticated retroelements in microbial genomes4
Transposable element dynamics in Xenopus laevis embryogenesis: a tale of two coexisting subgenomes4
A beginner’s guide to manual curation of transposable elements4
REPrise: de novo interspersed repeat detection using inexact seeding3
Co-expression of distinct L1 retrotransposon coiled coils can lead to their entanglement3
Further varieties of ancient endogenous retrovirus in human DNA3
Population analysis of retrotransposons in giraffe genomes supports RTE decline and widespread LINE1 activity in Giraffidae3
Interaction with eukaryotic cells enhances the circularization and transcription of integrative and conjugative elements in Mycoplasma hominis3
The sixth Japanese meeting on biological function and evolution through interactions between hosts and transposable elements3
IS26 carrying blaKPC−2 mediates carbapenem resistance heterogeneity in extensively drug-resistant Klebsiella pneumoniae isolated from clinical sites3
Subfamily-specific differential contribution of individual monomers and the tether sequence to mouse L1 promoter activity2
Evolution of Einkorn wheat centromeres is driven by the mutualistic interplay of two LTR retrotransposons2
Transposable element dynamics in glioblastoma stem cells: insights from locus-specific quantification2
The coevolution between APOBEC3 and retrotransposons in primates2
Teleost genomic repeat landscapes in light of diversification rates and ecology2
Subtelomeric repeat expansion in Hydractinia symbiolongicarpus chromosomes2
Marine vs. terrestrial: links between the environment and the diversity of Copia retrotransposon in metazoans1
Transposon expression and repression in skeletal muscle1
SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses1
The highly diverse repertoire of transposable elements within the genomes of parasitic wasps (Hymenoptera: Braconidae)1
Expression of down-regulated ERV LTR elements associates with immune activation in human small-cell lung cancers1
Controlling and controlled elements: highlights of the year in mobile DNA research1
Exploring transposable elements: new horizons in cancer diagnostics and therapeutics1
Reproducible evaluation of transposable element detectors with McClintock 2 guides accurate inference of Ty insertion patterns in yeast1
Evolutionary dynamics of the LTR-retrotransposon crapaud in the Podospora anserina species complex and the interaction with repeat-induced point mutations1
Compilation of all known HERV-K HML-2 proviral integrations1
Obituary: Haig Kazazian and Horizontal Transfer (1937 – 2022)1
Genomic analysis reveals the role of integrative and conjugative elements in plant pathogenic bacteria1
Comprehensive analysis of both long and short read transcriptomes of a clonal and a seed-propagated model species reveal the prerequisites for transcriptional activation of autonomous and non-autonomo1
Telomeric retrotransposons show propensity to form G-quadruplexes in various eukaryotic species1
Gene and transposable element expression in response to stress in temperate and tropical populations of Drosophila1
Tandem LTR-retrotransposon structures are common and highly polymorphic in plant genomes1
A genome-wide study of ruminants uncovers two endogenous retrovirus families recently active in goats1
Themes and variations on piRNA-guided transposon control1
Identification and functional analysis of recent IS transposition events in rhizobia1
CRISPR-TE: a web-based tool to generate single guide RNAs targeting transposable elements1
Transposable elements in genomic architecture of Monilinia fungal phytopathogens and TE-driven DMI-resistance adaptation1
Alternative splicing of transposable elements in human breast cancer1
Mobility of mPing and its associated elements is regulated by both internal and terminal sequences1
Retro-miRs: novel and functional miRNAs originating from mRNA retrotransposition1
SETMAR, a case of primate co-opted genes: towards new perspectives1
KRAB zinc finger protein ZNF676 controls the transcriptional influence of LTR12-related endogenous retrovirus sequences1
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