Mobile DNA

Papers
(The TQCC of Mobile DNA is 12. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-05-01 to 2024-05-01.)
ArticleCitations
The Dfam community resource of transposable element families, sequence models, and genome annotations294
Twenty years of transposable element analysis in the Arabidopsis thaliana genome68
The IS6 family, a clinically important group of insertion sequences including IS2661
Transposable elements in Drosophila59
Transposable element-derived sequences in vertebrate development48
Evolution of pogo, a separate superfamily of IS630-Tc1-mariner transposons, revealing recurrent domestication events in vertebrates44
A beginner’s guide to manual curation of transposable elements40
Phylogenetic analysis of the Tc1/mariner superfamily reveals the unexplored diversity of pogo-like elements33
Transcriptional activity of transposable elements along an elevational gradient in Arabidopsis arenosa32
Unbiased profiling of CRISPR RNA-guided transposition products by long-read sequencing32
SINE jumping contributes to large-scale polymorphisms in the pig genomes21
Transposable element abundance correlates with mode of transmission in microsporidian parasites21
RIP-seq reveals LINE-1 ORF1p association with p-body enriched mRNAs20
Comprehensive genomic analysis reveals dynamic evolution of endogenous retroviruses that code for retroviral-like protein domains20
Identification of RAG-like transposons in protostomes suggests their ancient bilaterian origin19
KRAB zinc finger protein ZNF676 controls the transcriptional influence of LTR12-related endogenous retrovirus sequences19
Migrators within migrators: exploring transposable element dynamics in the monarch butterfly, Danaus plexippus18
Transposable elements as essential elements in the control of gene expression17
Whole-genome analysis reveals the contribution of non-coding de novo transposon insertions to autism spectrum disorder17
Intruder (DD38E), a recently evolved sibling family of DD34E/Tc1 transposons in animals16
TE Hub: A community-oriented space for sharing and connecting tools, data, resources, and methods for transposable element annotation15
Genomic properties of variably methylated retrotransposons in mouse15
Software evaluation for de novo detection of transposons14
Association analysis of repetitive elements and R-loop formation across species14
Transposons and satellite DNA: on the origin of the major satellite DNA family in the Chenopodium genome14
Identification and characterisation of endogenous Avian Leukosis Virus subgroup E (ALVE) insertions in chicken whole genome sequencing data13
Transposable element subfamily annotation has a reproducibility problem12
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