OOIR: Observatory of International Research

Papers

(The median citation count of Aquaculture Environment Interactions is 3. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-04-01 to 2025-04-01.)

Article	Citations
Salmon lice loads on Atlantic salmon smolts associated with reduced welfare and increased population mortalities	37
Ecological co-benefits from sea cucumber farming: Holothuria scabra increases growth rate of seagrass	24
Impact of oyster culture on coral reef bacterioplankton community composition and function in Daya Bay, China	15
Breaking bags and crunching clams: assessing whitespotted eagle ray interactions with hard clam aquaculture gear	14
Effects of organic particle deposition on porewater oxygenation and oxygen exchange in cohesive sediment	14
Fish farm effluents cause metabolic depression, reducing energy stores and growth in the reef-forming coral Lophelia pertusa	14
Quantification of finfish assemblages associated with mussel and seaweed farms in southwest UK provides evidence of potential benefits to fisheries	13
Aquaculture organic enrichment of marine sediments: assimilative capacity, geochemical indicators, variability, and impact classification	11
Analysing ecological carrying capacity of bivalve aquaculture within the Yellow River Estuary ecoregion through mass-balance modelling	11
De novo reefs: Fish habitat provision by oyster aquaculture varies with farming method	10
Searching for sea lice: surveillance to assess environmental infection pressures to model and inform sea lice infestation management	10
Use of Bacillus subtilis D9 to purify coastal aquaculture wastewater and improve grass carp resistance to Vibrio infection	9
Ecosystem modelling to assess the impact of rearing density, environment variability and mortality on oyster production	9
Salmon lice nauplii and copepodids display different vertical migration patterns in response to light	9
Exploring video and eDNA metabarcoding methods to assess oyster aquaculture cages as fish habitat	9
A fish’s-eye-view: accessible tools to document shellfish farms as marine habitat in New Jersey, USA	9
A statistical mechanistic approach including temperature and salinity effects to improve salmon lice modelling of infestation pressure	8
Tolerance to fluctuating currents in farmed Atlantic salmon: a novel method to simulate offshore wave effects in the laboratory	8
Temporal changes in visual organic enrichment indicators at an aquaculture site over mixed- and hard-bottom substrates	8
Modeling of waste outputs in the aquatic environment from a commercial cage farm under neotropical climate conditions	8
Validating a biophysical parasite model with fish farm pen and plankton trawl data	7
Spatial response of hard- and mixed-bottom benthic epifauna to organic enrichment from salmon aquaculture in northern Norway	7
Movement of american lobster Homarus americanus associated with offshore mussel Mytilus edulis aquaculture	7
Nekton use of co-occurring aquaculture and seagrass structure on tidal flats	7
Movement of American lobsters Homarus americanus and rock crabs Cancer irroratus around mussel farms in Malpeque Bay, Prince Edward Island, Canada	7

Increased growth metabolism promotes viral infection in a susceptible oyster population	7
Genetic structure and origin of non-native, free-living Atlantic salmon Salmo salar along a latitudinal gradient in Chile, South America	7
System-specific salmon louse infestation thresholds for salmon farms to minimize impacts on wild sea trout populations	6
Effects of floating oyster aquaculture on a Zostera marina (eelgrass) dominated bed in Chesapeake Bay	6
Considering elements of natural strategies to control salmon lice infestation in marine cage culture	6
Effects of razor clam polyculture on plankton size fraction structure and carbon metabolism in an aquaculture system of crabs and shrimp	6
Intestinal microbial diversity and functional analysis of Urechis unicinctus from two different habitats: pond polycultured with Penaeus japonicus and coastal zone	5
Low-impact rearing of a commercially valuable shellfish: sea-based container culture of European lobster Homarus gammarus in the United Kingdom	5
Modeling salmon lice effects on sea trout population dynamics using an individual-based approach	5
Recognising trade-offs between welfare and environmental outcomes in aquaculture will enable good decisions	5
Assimilation of fish farm wastes by the ecosystem engineering bivalve Atrina zelandica	5
Pacific oysters are a sink and a potential source of the eelgrass pathogen, Labyrinthula zosterae	5
Quantifying regional feed utilization, production and nutrient waste emission of Norwegian salmon cage aquaculture	5
Reduced physiological performance in a free-living coralline alga induced by salmon faeces deposition	5
Feeding indicators and bioremediation ability of warty sea cucumber Neostichopus grammatus fed potential wastes from abalone Haliotis midae farming	4
Monitoring regional benthic environment of Norwegian salmon cage farms	4
Consumption of periphyton and bioseston by Mozambique tilapia in aqua dams with three different substrates	4
A gap analysis on modelling of sea lice infection pressure from salmonid farms. II. Identifying and ranking knowledge gaps: output of an international workshop	4
Effects on enzyme activity and DNA integrity in rainbow trout Oncorhynchus mykiss exposed to fish farm effluents	4
Oyster aquaculture enhances sediment microbial diversity: insights from a multi-omics study	4
Offshore aquaculture as climate change adaptation in coastal areas: sea surface temperature trends in the Western Mediterranean Sea	4
Disentangling the key drivers of the salmon louse Lepeophtheirus salmonis fecundity using multiyear field samples	4
Aquaculture carrying capacity of Nile tilapia Oreochromis niloticus and Nile crocodile Crocodylus niloticus in Lake Kariba, Zambia and Zimbabwe	3
Resource-use efficiency in US aquaculture: farm-level comparisons across fish species and production systems	3
Aquaculture and eelgrass Zostera marina interactions in temperate ecosystems	3
Influence of seagrass on juvenile Pacific oyster growth in two US west coast estuaries with different environmental gradients	3
Modelling salmon lice-induced mortality of wild salmon post-smolts is highly sensitive to calibration data	3
Development of a risk assessment method for sea trout in coastal areas exploited for aquaculture	3
Estuarine community response to longline spacing in intertidal oyster culture	3
Fitness consequences of hybridization between wild Newfoundland and farmed European and North American Atlantic salmon	3
Research pre-empting parasite adaptation is key to sustainable disease management in aquaculture	3
Impacts of large-scale aquaculture activities on the seawater carbonate system and air-sea CO2 flux in a subtropical mariculture bay, southern China	3
CORRECTION: Temporal variation in sea trout Salmo trutta life history traits in the Erriff River, western Ireland	3
Adding fish waste to the diet of Iceland scallop Chlamys islandica: effects on feeding and reproductive ability	3