Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Papers
(The TQCC of Biochimica et Biophysica Acta-Gene Regulatory Mechanisms is 8. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-01-01 to 2026-01-01.)
ArticleCitations
Bioinformatic meta-analysis of transcriptomics of developing Drosophila muscles identifies temporal regulatory transcription factors including a Notch effector69
From why to how; The gene expression knowledge commons35
Rho-dependent transcription termination is the dominant mechanism in Mycobacterium tuberculosis33
The plant nucleoplasmin AtFKBP43 needs its extended arms for histone interaction31
Histone variant H2B.Z acetylation is necessary for maintenance of Toxoplasma gondii biological fitness27
The nucleolus: Coordinating stress response and genomic stability24
Illuminating ligand-induced dynamics in nuclear receptors through MD simulations23
Editorial Board21
HBO1, a MYSTerious KAT and its links to cancer19
Transposon insertion causes ctnnb2 transcript instability that results in the maternal effect zebrafish ichabod (ich) mutation19
Dietary choline prevents high fat-induced disorder of hepatic cholesterol metabolism through SREBP-2/HNF-4α/CYP7A1 pathway in a freshwater teleost yellow catfish Pelteobagrus fulvidraco18
Genome-wide survey identifies TNNI2 as a target of KLF7 that inhibits chicken adipogenesis via downregulating FABP418
Epigenetic modification facilitates proline synthase PYCR1 aberrant expression in gastric cancer16
Transcriptional landscape of long non-coding RNAs (lncRNAs) and its implication in viral diseases16
Histone acetyltransferase 1 (HAT1) acetylates hypoxia-inducible factor 2 alpha (HIF2A) to execute hypoxia response16
UBE4A catalyzes NRF1 ubiquitination and facilitates DDI2-mediated NRF1 cleavage16
Dealing with different conceptions of pollution in the Gene Regulation Knowledge Commons15
Proteomic approaches to study ubiquitinomics14
Editorial Board14
Editorial Board13
N/C-degron pathways and inhibitor development for PROTAC applications13
Differential requirements for different subfamilies of the mammalian SWI/SNF chromatin remodeling enzymes in myoblast cell cycle progression and expression of the Pax7 regulator13
Inflammation-induced nitric oxide suppresses PPARα expression and function via downregulation of Sp1 transcriptional activity in adipocytes13
The versatility of the proteasome in gene expression and silencing: Unraveling proteolytic and non-proteolytic functions13
Effective role of Curcumin on expression regulation of EZH2 histone methyltransferase as a dynamic epigenetic factor in osteogenic differentiation of human mesenchymal stem cells13
Post-translational modifications of lysine-specific demethylase 113
The role of nucleotide opening dynamics in facilitated target search by DNA-repair proteins13
DDX5 (p68) orchestrates β-catenin, RelA and SP1 mediated MGMT gene expression in human colon cancer cells: Implication in TMZ chemoresistance13
The gene regulation knowledge commons: the action area of GREEKC13
The crucial role of small heat shock proteins in prostate cancer: mechanisms and new therapeutic perspectives12
Editorial Board12
Post translational modifications at the verge of plant-geminivirus interaction11
Quantitative proteomics revealed the transition of ergosterol biosynthesis and drug transporters processes during the development of fungal fluconazole resistance11
Regulatory systems of chicken alpha-globin gene domain suppress bidirectional transcription11
The yeast mRNA-binding protein Cth2 post-transcriptionally modulates ergosterol biosynthesis in response to iron deficiency11
RNA-protein interaction techniques - A historical and comparative analysis10
Insight into the mechanism of AML del(9q) progression: hnRNP K targets the myeloid master regulators CEBPA (C/EBPα) and SPI1 (PU.1)10
Differences and similarities in recognition of co-factors by Taf1410
The N-degron pathway: From basic science to therapeutic applications10
Sirtuin4 impacts mitochondrial homeostasis in pancreatic cancer cells by reducing the stability of AlkB homolog 1 via deacetylation of the HRD1-SEL1L complex10
EBV infection alters DNA methylation in primary human colon cells: A path to inflammation and carcinogenesis?10
The mechanism of UP1 binding and unfolding of human telomeric DNA G-quadruplex10
Specific DNA features of the RNA polymerase I core promoter element targeted by core factor10
The Catsper3 promoter activity is regulated by the cAMP-Response Element Modulator tau (CREMτ) and the cAMP-Response Element Binding protein 1A (CREBA) transcription factors10
The moonlighting of RAD23 in DNA repair and protein degradation10
Polycomb repressive complex 1 initiates and maintains tailless repression in Drosophila embryo10
Ser392 phosphorylation modulated a switch between p53 and transcriptional condensates10
Allelic variation within the major APOE CpG island affects its methylation in the brain of targeted replacement mice expressing human APOE9
Disruption of the gene regulatory programme in neurodevelopmental disorders9
The fine-tuned crosstalk between lysine acetylation and the circadian rhythm9
Unraveling the battle for lysine: A review of the competition among post-translational modifications9
METTL3 activates PERK-eIF2α dependent coelomocyte apoptosis by targeting the endoplasmic reticulum degradation-related protein SEL1L in echinoderms9
Machine learning based analysis of single-cell data reveals evidence of subject-specific single-cell gene expression profiles in acute myeloid leukaemia patients and healthy controls9
The presence of an intron relieves gene repression caused by promoter-proximal four-bp specific sequences in yeast9
UPS regulation of gene expression and genome integrity8
Expression of CMK2 is controlled by the general stress-response transcriptional factor Msn2 through a single STRE site in budding yeast8
Metabolic substrates, histone modifications, and heart failure8
Protein post-translational modifications: A key factor in colorectal cancer resistance mechanisms8
MicroRNA-27a-3p targeting Vangl1 and Vangl2 inhibits cell proliferation in mouse granulosa cells8
AutoFAIR-A portal for automating FAIR assessments for bioinformatics resources8
Influence of cell volume on the gene transcription rate8
Human stem cell-specific epigenetic signatures control transgene expression8
Isolation and characterisation of promoters from mouse genome to drive post-meiotic germ cell-specific robust gene expression for functional genomics studies8
GLI1, a novel target of the ER stress regulator p97/VCP, promotes ATF6f-mediated activation of XBP18
Navigating the tumor landscape: VEGF, MicroRNAs, and the future of cancer treatment8
Ubiquitination is a major modulator for the activation of inflammasomes and pyroptosis8
KDM5A noncanonically binds antagonists MLL1/2 to mediate gene regulation and promotes epithelial to mesenchymal transition8
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