Annals of Applied Statistics

Article	Citations
Latent variable models for multivariate dyadic data with zero inflation: Analysis of intergenerational exchanges of family support	33
Likelihood-based bacterial identification approach for bimicrobial mass spectrometry data	24
Composite mixture of log-linear models with application to psychiatric studies	23
Inferring synergistic and antagonistic interactions in mixtures of exposures	22
Analysing the causal effect of London cycle superhighways on traffic congestion	20
ALPHA: Audit that learns from previously hand-audited ballots	19
Factor-assisted learning of ultrahigh-dimensional covariates with distributed functional and scalar mixtures with applications to the Avon Longitudinal Study of Parents and Children	18
Accurate estimation of rare cell-type fractions from tissue omics data via hierarchical deconvolution	18
Predicting gender employment discrepancies: A multivariate Fay-Herriot model for transformed proportions	17
Multilevel time-series models for small area estimation at different frequencies and domain levels	17
Uncertainty quantification of a computer model for binary black hole formation	16
Modeling the social media relationships of Irish politicians using a generalized latent space stochastic blockmodel	16
The risk of maternal complications after cesarean delivery: Near-far matching for instrumental variables study designs with large observational datasets	15
Two-sample tests for multivariate repeated measurements of histogram objects with applications to wearable device data	15
Modeling panels of extremes	15
Zero-inflated quantile rank-score based test (ZIQRank) with application to scRNA-seq differential gene expression analysis	15
Graph link prediction in computer networks using Poisson matrix factorisation	14
A latent mixture model for heterogeneous causal mechanisms in Mendelian randomization	14
Sequential Monte Carlo for sampling balanced and compact redistricting plans	14
Control charts for dynamic process monitoring with an application to air pollution surveillance	12
Dirichlet-tree multinomial mixtures for clustering microbiome compositions	11
Statistical matching and subclassification with a continuous dose: Characterization, algorithm, and application to a health outcomes study	11
DeepMap: Deep learning-based single-cell data integration using iterative cell matching and structure preservation constraints	11
Data-driven chimney fire risk prediction using machine learning and point process tools	10
Joint mixed membership modeling of multivariate longitudinal and survival data for learning the individualized disease progression	10

Marginally calibrated response distributions for end-to-end learning in autonomous driving	10
Variable screening and spatial smoothing in Fréchet regression with application to diffusion tensor imaging	10
Identifying peer influence in therapeutic communities adjusting for latent homophily	10
Penalized joint models of high-dimensional longitudinal biomarkers and a survival outcome	10
A Bayesian decision framework for optimizing sequential combination antiretroviral therapy in people with HIV	10
On the fair comparison of optimization algorithms in different machines	10
Flexible multivariate spatiotemporal Hawkes process models of terrorism	10
Inference for stochastic kinetic models from multiple data sources for joint estimation of infection dynamics from aggregate reports and virological data	9
Disentangling the structure of ecological bipartite networks from observation processes	9
PoD-BIN: A probability of decision Bayesian interval design for time-to-event dose-finding trials with multiple toxicity grades	9
Bayesian hierarchical random-effects meta-analysis and design of phase I clinical trials	9
Semiparametric linear regression with an interval-censored covariate in the atherosclerosis risk in communities study	9
Randomization inference for cluster-randomized test-negative designs with application to Dengue studies: Unbiased estimation, partial compliance, and stepped-wedge design	9
Approximate Bayesian inference for analysis of spatiotemporal flood frequency data	9
Risk set matched difference-in-differences for the analysis of effect modification in an observational study on the impact of gun violence on health outcomes	9
Real-time mechanistic Bayesian forecasts of COVID-19 mortality	9
Markov-modulated Hawkes processes for modeling sporadic and bursty event occurrences in social interactions	8
Modeling cell populations measured by flow cytometry with covariates using sparse mixture of regressions	8
Latent level correlation modeling of multivariate discrete-valued financial time series	8
Latent conjunctive Bayesian network: Unify attribute hierarchy and Bayesian network for cognitive diagnosis	8
A privacy-preserved and high-utility synthesis strategy for risk-based stratified subgroups of the Canadian scleroderma patient registry data	8
Tensor quantile regression with low-rank tensor train estimation	8
Bayesian multivariate sparse functional principal components analysis with application to longitudinal microbiome multiomics data	8
Testing for the causal mediation effects of multiple mediators using the kernel machine difference method in genome-wide epigenetic studies	8
EBiCop: Ensemble bivariate copulas for modeling multivariate cyber data breach risks	8
An efficient doubly-robust imputation framework for longitudinal dropout, with an application to an Alzheimer’s clinical trial	8
Varying impacts of letters of recommendation on college admissions	7
Endogeneity and moments in time series momentum’s predictability test	7
An extension of estimating equations to model longitudinal medical cost trajectory with Medicare claims data linked to SEER cancer registry	7
Matrix completion methods for the total electron content video reconstruction	7
ANOPOW for replicated nonstationary time series in experiments	7
Generalized theme dictionary models for association pattern discovery	7
Continuous-time modelling of behavioural responses in animal movement	7
Modelling extremes of spatial aggregates of precipitation using conditional methods	7
Leveraging cellphone-derived mobility networks to assess Covid-19 travel risk	7
Predicting milk traits from spectral data using Bayesian probabilistic partial least squares regression	7
Modeling structure and country-specific heterogeneity in misclassification matrices of verbal autopsy-based cause of death classifiers	7
Postelection analysis of presidential election/poll data	7
Bidimensional linked matrix factorization for pan-omics pan-cancer analysis	7
Nonparametric importance sampling for wind turbine reliability analysis with stochastic computer models	7
Pairwise nonlinear dependence analysis of genomic data	7
Clustering and meta-analysis using a mixture of dependent linear tail-free priors	7
Communication network dynamics in a large organizational hierarchy	6
Using proxies to improve forecast evaluation	6
Estimating COVID-19 vaccine protection rates via dynamic epidemiological models—a study of 10 countries	6
Multiple imputation of hierarchical nonlinear time series data with an application to school enrollment data	6
Assessing treatment effect through compliance score in randomized trials with noncompliance	6
Association and causation: Attributes and effects of judges in equal employment opportunity commission litigation outcomes	6
Comparing baseball players across eras via novel Full House Modeling	6
Readability prediction: How many features are necessary?	6

Corrigendum Modeling biomarker ratios with gamma distributed components	6
Outcome-guided disease subtyping by generative model and weighted joint likelihood in transcriptomic applications	6
Distributed subsampling and quasi decorrelated score for cluster data: An application to Beijing multisite air quality	6
Probabilistic HIV recency classification—a logistic regression without labeled individual level training data	6
A three-state coupled Markov switching model for COVID-19 outbreaks across Quebec based on hospital admissions	6
Estimation and inference for exposure effects with latency in the Cox proportional hazards model in the presence of exposure measurement error	6
Subbotin graphical models for extreme value dependencies with applications to functional neuronal connectivity	6
Early effects of 2014 U.S. Medicaid expansions on mortality: Design-based inference for impacts on small subgroups despite small-cell suppression	6
Social distancing and COVID-19: Randomization inference for a structured dose-response relationship	6
Compressed spectral screening for large-scale differential correlation analysis with application in selecting Glioblastoma gene modules	6
Individual dynamic prediction for cure and survival based on longitudinal biomarkers	6
Estimating product cannibalisation in wholesale using multivariate Hawkes processes with inhibition	5
Flexible instrumental variable models with Bayesian additive regression trees	5
Nonparametric causal decomposition of group disparities	5
Design-based inference for spatial experiments under unknown interference	5
Tracking hematopoietic stem cell evolution in a Wiskott–Aldrich clinical trial	5
Estimating Covid-19 transmission time using Hawkes point processes	5
A latent variable approach for modeling relational data with multiple receivers	5
Graph-aware modeling of brain connectivity networks	5
A Bayesian record linkage approach to applications in tree demography using overlapping LiDAR scans	5
Causal inference for the effect of mobility on COVID-19 deaths	5
Semiparametric estimation for dynamic networks with shifted connecting intensities	5
Network method for voxel-pair-level brain connectivity analysis under spatial-contiguity constraints	5
TEAM: A multiple testing algorithm on the aggregation tree for flow cytometry analysis	5
Contrastive latent variable modeling with application to case-control sequencing experiments	5
Nested conformal prediction sets for classification with applications to probation data	5
Parameter calibration in wake effect simulation model with stochastic gradient descent and stratified sampling	5
Functional clustering for longitudinal associations between social determinants of health and stroke mortality in the U.S.	5
Complex discontinuity designs using covariates: Impact of school grade retention on later life outcomes in Chile	5
Deconvolution analysis of spatial transcriptomics by multiplicative-additive Poisson-gamma models	5
Spatial predictions on physically constrained domains: Applications to Arctic sea salinity data	5
Tensor regression for incomplete observations with application to longitudinal studies	5
Pan-disease clustering analysis of the trend of period prevalence	5
Computationally efficient Bayesian unit-level models for non-Gaussian data under informative sampling with application to estimation of health insurance coverage	5
Temporal network influence model with application to the COVID-19 population flow network	5
Latent subgroup identification in image-on-scalar regression	5
Assessing aquatic toxicity assessment via a clustered variance model	5
Bayesian model selection: Application to the adjustment of fundamental physical constants	5
Sparse block signal detection and identification for shared cross-trait association analysis	4
What makes forest-based heterogeneous treatment effect estimators work?	4
Inhomogeneous spatio-temporal point processes on linear networks for visitors’ stops data	4
Improved inference on risk measures for univariate extremes	4
How many refugees and migrants died trying to reach Europe? Joint population size and total estimation	4
Measuring information transfer between nodes in a brain network through spectral transfer entropy	4
Joint modeling of playing time and purchase propensity in massively multiplayer online role-playing games using crossed random effects	4
Neural networks for extreme quantile regression with an application to forecasting of flood risk	4
Network differential connectivity analysis	4
Joint stochastic simulation of extreme coastal and offshore significant wave heights	4
Learn then test: Calibrating predictive algorithms to achieve risk control	4
A functional-data approach to the Argo data	4
Learning risk preferences in Markov decision processes: An application to the fourth down decision in the national football league	4
Regularized fingerprinting in detection and attribution of climate change with weight matrix optimizing the efficiency in scaling factor estimation	4
Estimating the effectiveness of permanent price reductions for competing products using multivariate Bayesian structural time series models	4
Heterogeneous network analysis of disease clinical treatment measures via mining electronic medical record data	4
Nonparametric additive value functions: Interpretable reinforcement learning with an application to surgical recovery	4
Bayesian local false discovery rate for sparse count data with application to the discovery of hotspots in protein domains	4
Benefits and costs of matching prior to a difference in differences analysis when parallel trends does not hold	4
Integrating Mendelian randomization with causal mediation analyses for characterizing direct and indirect exposure-to-outcome effects	4
Multivariate mixed membership modeling: Inferring domain-specific risk profiles	4
A Bayesian precision medicine framework for calibrating individualized therapeutic indices in cancer	4
Bayesian non-homogeneous hidden Markov model with variable selection for investigating drivers of seizure risk cycling	4
Statistical curve models for inferring 3D chromatin architecture	4
Scalable change-point and anomaly detection in cross-correlated data with an application to condition monitoring	4
A high-dimensional approach to measure connectivity in the financial sector	4
Design-based mapping of land use/land cover classes with bootstrap estimation of precision by nearest-neighbour interpolation	4
Modeling animal movement with directional persistence and attractive points	4
Structure learning for zero-inflated counts with an application to single-cell RNA sequencing data	4
Spatial functional data modeling of plant reflectances	4
Model-robust Bayesian design through generalised additive models for monitoring submerged shoals	4
Knockoffs with side information	4
CeCNN: Copula-enhanced convolutional neural networks in joint prediction of refraction error and axial length based on ultra-widefield fundus images	4
Multimodel ensemble analysis with neural network Gaussian processes	4
Learning common structures in a collection of networks. An application to food webs	4
Are made and missed different? An analysis of field goal attempts of professional basketball players via depth based testing procedure	4
Federated learning of robust individualized decision rules with application to heterogeneous multihospital sepsis population	3
Identifying boundaries in spatially continuous risk surfaces from spatially aggregated disease count data	3
Estimating heterogeneous gene regulatory networks from zero-inflated single-cell expression data	3
The causal effect of a timeout at stopping an opposing run in the NBA	3
Estimating the average treatment effect in randomized clinical trials with all-or-none compliance	3
Spatiotemporal wildfire modeling through point processes with moderate and extreme marks	3

Bayesian inference for partial orders from random linear extensions: Power relations from 12th century royal acta	3
A Riemann manifold model framework for longitudinal changes in physical activity patterns	3
Thompson sampling for zero-inflated count outcomes with an application to the Drink Less mobile health study	3
Is the price cap for gas useful? Evidence from European countries	3
Estimating functional parameters for understanding the impact of weather and government interventions on COVID-19 outbreak	3
Subgroup identification and variable selection for treatment decision making	3
Permutation tests under a rotating sampling plan with clustered data	3
A deep neural network two-part model and feature importance test for semicontinuous data	3
Semiparametric bivariate hierarchical state space model with application to hormone circadian relationship	3
A Bayesian panel vector autoregression to analyze the impact of climate shocks on high-income economies	3
Bayesian decision theory for tree-based adaptive screening tests with an application to youth delinquency	3
A Bayesian accelerated failure time model for interval censored three-state screening outcomes	3
Markov random field models for vector-based representations of landscapes	3
Network-level traffic flow prediction: Functional time series vs. functional neural network approach	3
Doubly-online changepoint detection for monitoring health status during sports activities	3
Estimation of Gaussian directed acyclic graphs using partial ordering information with applications to DREAM3 networks and dairy cattle data	3
Bayesian analysis of verbal autopsy data using factor models with age- and sex-dependent associations between symptoms	3
A spatial autoregressive random forest algorithm for small-area spatial prediction	3
The properties of covariate-adaptive randomization procedures with possibly unequal allocation ratio	3
Analysis of presence-only data via exact Bayes, with model and effects identification	3
Network-based modeling of emotional expressions for multiple cancers via a linguistic analysis of an online health community	3
Binned multinomial logistic regression for integrative cell-type annotation	3
Averaged Prediction Models (APM): Identifying causal effects in controlled pre-post settings with application to gun policy	3
Analyzing environmental bioassays with spatial odds, risk, and survival probability ratio regressions	3
Ordinal probit functional outcome regression with application to computer-use behavior in rhesus monkeys	3
Truncated rank-based tests for two-part models with excessive zeros and applications to microbiome data	3
Predicting competitions by combining conditional logistic regression and subjective Bayes: An Academy Awards case study	3
Bayesian Cox regression for large-scale inference with applications to electronic health records	3
Bivariate hierarchical Bayesian model for combining summary measures and their uncertainties from multiple sources	3
A Bayesian hierarchical model for combining multiple data sources in population size estimation	3
Scalable test of statistical significance for protein-DNA binding changes with insertion and deletion of bases in the genome	3
Improving exoplanet detection power: Multivariate Gaussian process models for stellar activity	3
Functional factor modeling of brain connectivity	3
Ice model calibration using semicontinuous spatial data	3
Do forecasts of bankruptcy cause bankruptcy? A machine learning sensitivity analysis	3
Modeling trajectories using functional linear differential equations	3
Bayesian learning of clinically meaningful sepsis phenotypes in northern Tanzania	3
A flexible Bayesian framework to estimate age- and cause-specific child mortality over time from sample registration data	3
Manifold valued data analysis of samples of networks, with applications in corpus linguistics	3
A flexible sensitivity analysis approach for unmeasured confounding with multiple treatments and a binary outcome with application to SEER-Medicare lung cancer data	3