Biology Open

Papers
(The TQCC of Biology Open is 4. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-05-01 to 2024-05-01.)
ArticleCitations
Cardiac myosin super relaxation (SRX): a perspective on fundamental biology, human disease and therapeutics51
Reissner fibre-induced urotensin signalling from cerebrospinal fluid-contacting neurons prevents scoliosis of the vertebrate spine40
Molecular mechanisms of neurodegeneration in the entorhinal cortex that underlie its selective vulnerability during the pathogenesis of Alzheimer's disease38
BMP-treated human embryonic stem cells transcriptionally resemble amnion cells in the monkey embryo32
Specificity and off-target effects of AAV8-TBG viral vectors for the manipulation of hepatocellular gene expression in mice27
Efficient and crucial quality control of HAP1 cell ploidy status25
Quantified growth of the human embryonic heart25
Uncharted routes: exploring the relevance of auxin movement via plasmodesmata22
A versatile, automated and high-throughput drug screening platform for zebrafish embryos20
Publishing ethics in the era of paper mills19
Three-dimensional model of glioblastoma by co-culturing tumor stem cells with human brain organoids18
RNA-Seq reveals changes in human placental metabolism, transport and endocrinology across the first–second trimester transition17
Recent developments of tools for genome and metabolome studies in basidiomycete fungi and their application to natural product research16
Genome wide association study for the identification of genes associated with tail fat deposition in Chinese sheep breeds16
Developmental disorders caused by haploinsufficiency of transcriptional regulators: a perspective based on cell fate determination15
Local adaptation in thermal tolerance for a tropical butterfly across ecotone and rainforest habitats15
ARL3 and ARL13B GTPases participate in distinct steps of INPP5E targeting to the ciliary membrane14
Redundant functions of the SLC5A transporters Rumpel, Bumpel, and Kumpel in ensheathing glial cells14
Motion: enhancing signals and concealing cues14
20-hydroxyecdysone (20E) signaling regulates amnioserosa morphogenesis during Drosophila dorsal closure: EcR modulates gene expression in a complex with the AP-1 subunit, Jun13
Auxin confers protection against ER stress in Caenorhabditis elegans13
The SARS-CoV-2 receptor and other key components of the Renin-Angiotensin-Aldosterone System related to COVID-19 are expressed in enterocytes in larval zebrafish13
Altered germline cyst formation and oogenesis in Tex14 mutant mice13
Dynamic neurotransmitter specific transcription factor expression profiles during Drosophila development12
The LRRK2 signaling network converges on a centriolar phospho-Rab10/RILPL1 complex to cause deficits in centrosome cohesion and cell polarization12
Bisphenol A promotes stress granule assembly and modulates the integrated stress response12
A Caenorhabditis elegans behavioral assay distinguishes early stage prostate cancer patient urine from controls12
Shifting away from the business-as-usual approach to research conferences12
Mechanical and energetic determinants of impaired gait following stroke: segmental work and pendular energy transduction during treadmill walking12
Efficient induction and sustenance of pluripotent stem cells from bovine somatic cells11
Specificity, redundancy and dosage thresholds among gata4/5/6 genes during zebrafish cardiogenesis11
Stability of amino acids and related amines in human serum under different preprocessing and pre-storage conditions based on iTRAQ®-LC-MS/MS11
Palmitoylated small GTPase ARL15 is translocated within Golgi network during adipogenesis11
CD47 differentially regulates white and brown fat function11
Neural crest cells require Meis2 for patterning the mandibular arch via the Sonic hedgehog pathway11
Beyond bold versus shy: Zebrafish exploratory behavior falls into several behavioral clusters and is influenced by strain and sex11
Gap junctions: historical discoveries and new findings in the C aenorhabditiselegans nervous system11
Conditional targeting of phosphatidylserine decarboxylase to lipid droplets10
Auxin treatment increases lifespan in Caenorhabditis elegans10
KDM5A and KDM5B histone-demethylases contribute to HU-induced replication stress response and tolerance9
Euglena International Network (EIN): Driving euglenoid biotechnology for the benefit of a challenged world9
Convergent acoustic community structure in South Asian dry and wet grassland birds9
Quantitative analysis of signaling responses during mouse primordial germ cell specification9
Computational anatomy and geometric shape analysis enables analysis of complex craniofacial phenotypes in zebrafish9
Sleep-length differences are associated with altered longevity in the fruit fly Drosophila melanogaster9
Connecting different heart diseases through intercellular communication9
Eye morphogenesis in the blind Mexican cavefish9
Compartment and cell-type specific hypoxia responses in the developing Drosophila brain9
Presynaptic HCN channels constrain GABAergic synaptic transmission in pyramidal cells of the medial prefrontal cortex9
High glucose induces Nox4 expression and podocyte apoptosis through the Smad3/ezrin/PKA pathway8
A glucose-supplemented diet enhances gut barrier integrity in Drosophila8
The Drosophila orthologue of the primary ciliary dyskinesia-associated gene, DNAAF3, is required for axonemal dynein assembly8
Muscle forces and the demands of human walking8
Myotonic dystrophy type 1 embryonic stem cells show decreased myogenic potential, increased CpG methylation at the DMPK locus and RNA mis-splicing8
Synovial joint cavitation initiates with microcavities in interzone and is coupled to skeletal flexion and elongation in developing mouse embryo limbs8
Basement membrane dynamics and mechanics in tissue morphogenesis8
Biophysical and biochemical properties of Deup1 self-assemblies: a potential driver for deuterosome formation during multiciliogenesis8
Heart rate and startle responses in diving, captive harbour porpoises (Phocoena phocoena) exposed to transient noise and sonar7
Perinatal exposure to synergistic multiple stressors leads to cellular and behavioral deficits mimicking Schizophrenia-like pathology7
Downregulated brain and muscle aryl hydrocarbon receptor nuclear translocator-like protein-1 inhibits osteogenesis of BMSCs through p53 in type 2 diabetes mellitus7
Apoptosis is a generator of Wnt-dependent regeneration and homeostatic cell renewal in the ascidian Ciona7
Design of a 3D printed, motorized, uniaxial cell stretcher for microscopic and biochemical analysis of mechanotransduction7
Validating accelerometry-derived proxies of energy expenditure using the doubly labelled water method in the smallest penguin species7
Downstream events initiated by expression of FSHD-associated DUX4: Studies of nucleocytoplasmic transport, γH2AX accumulation, and Bax/Bak-dependence7
Transduction of rat and human adipose-tissue derived mesenchymal stromal cells by adeno-associated viral vector serotype DJ7
Influence of weighted downhill running training on serial sarcomere number and work loop performance in the rat soleus7
Requirement for STAT3 and its target, TFCP2L1, in self-renewal of naïve pluripotent stem cells in vivo and in vitro7
Src family kinases inhibit differentiation of intestinal epithelial cells through the Hippo effector YAP17
Pigment pattern morphospace ofDaniofishes: evolutionary diversification and mutational effects7
RGS5: a novel role as a hypoxia-responsive protein that suppresses chemokinetic and chemotactic migration in brain pericytes7
The importance of considering regulatory domains in genome-wide analyses – the nearest gene is often wrong!7
Actin cytoskeleton in angiogenesis7
Cerebral organoids in primary progressive multiple sclerosis reveal stem cell and oligodendrocyte differentiation defect7
Postnatal expression profiles of atypical cadherin FAT1 suggest its role in autism6
Interaction between Discs large and Pins/LGN/GPSM2: a comparison across species6
A mouse model displays host and bacterial strain differences in Aerococcus urinae urinary tract infection6
Mutations in the splicing regulator Prp31 lead to retinal degeneration in Drosophila6
A Year at the Forefront of Engineering Photosynthesis6
A nematode-derived, mitochondrial stress signaling-regulated peptide exhibits broad antibacterial activity6
Mummichog gill and operculum exhibit functionally consistent claudin-10 paralog profiles and Claudin-10c hypersaline response6
MicroRNA-9-5p inhibits proliferation and induces apoptosis of human hypertrophic scar fibroblasts through targeting peroxisome proliferator-activated receptor β6
A guide to preprinting for early-career researchers6
Effect of heterogeneous substrate adhesivity of follower cells on speed and tension profile of leader cells in primary keratocyte collective cell migration6
Alone in a crowd: effect of a nonfunctional lateral line on expression of the social hormone parathyroid hormone 26
Fracture biomechanics influence local and systemic immune responses in a murine fracture-related infection model6
Zebrafish models of alx-linked frontonasal dysplasia reveal a role for Alx1 and Alx3 in the anterior segment and vasculature of the developing eye6
Responses to transient receptor potential (TRP) channel agonists inChlamydomonas reinhardtii6
The dorsal blastopore lip is a source of signals inducing planar cell polarity in the Xenopus neural plate6
Regulation of NANOG and SOX2 expression by activin A and a canonical WNT agonist in bovine embryonic stem cells and blastocysts6
MonitoringSchizosaccharomyces pombegenome stress by visualizing end-binding protein Ku6
Tissue-specific transcriptome profiles identify functional differences key to understanding whole plant response to life in variable salinity6
Lifespan and ROS levels in different Drosophila melanogaster strains after 24 h hypoxia exposure6
Associative learning in larval and adultDrosophilais impaired by the dopamine-synthesis inhibitor 3-Iodo-L-tyrosine6
A kinase translocation reporter reveals real-time dynamics of ERK activity in Drosophila6
Modulation of retinoid-X-receptors differentially regulates expression of apolipoprotein genes apoc1 and apoeb by zebrafish microglia6
The uncoating of EV71 in mature late endosomes requires CD-M6PR6
Energetics of whiskered bats in comparison to other bats of the family Vespertilionidae6
Variations in oxidative stress and antioxidant defense level during different phases of hibernation in common Asian toad,Duttaphrynus melanostictus6
Vitamin D receptor absence does not enhance intestinal tumorigenesis in ApcPirc/+rats5
Exocrine pancreas proteases regulate β-cell proliferation in zebrafish ciliopathy models and in murine systems5
Oviductal fluid counterbalances the negative effect of high temperature on sperm in an ectotherm model5
Developmental expression patterns of toolkit genes in male accessory gland ofDrosophilaparallels those of mammalian prostate5
Development of a highly pulmonary metastatic orthotopic renal cell carcinoma murine model5
Soluble receptor for advanced glycation end products protects from ischemia- and reperfusion-induced acute kidney injury5
Drosophila hemocytes recognize lymph gland tumors of mxc mutants and activate the innate immune pathway in a reactive oxygen species-dependent manner5
Phenotype assessment for neurodegenerative murine models with ataxia and application to Niemann–Pick disease, type C15
Research culture: science from bench to society5
Serotonin: an overlooked regulator of endocytosis and endosomal sorting?5
Phospholipids containing ether-bound hydrocarbon-chains are essential for efficient phagocytosis and neutral lipids of the ester-type perturb development in Dictyostelium5
Three functional polymorphisms in CCDC170 were associated with osteoporosis phenotype5
Mutations in Drosophila tRNA processing factors cause phenotypes similar to Pontocerebellar Hypoplasia5
Orally administered branaplam does not impact neurogenesis in juvenile mice, rats, and dogs5
Antimicrobial peptide expression in the cockroach gut during enterobacterial infection is specific and influenced by type III secretion5
Smoking flies: testing the effect of tobacco cigarettes on heart function ofDrosophila melanogaster5
Viral species differentially influence macronutrient preferences based on honey bee genotype5
EPCAM and TROP2 share a role in claudin stabilization and development of intestinal and extraintestinal epithelia in mice5
A human stem cell resource to decipher the biochemical and cellular basis of neurodevelopmental defects in Lowe syndrome5
Patterns of variations in dorsal colouration of the Italian wall lizard Podarcis siculus5
A fully automated deep learning pipeline for high-throughput colony segmentation and classification5
Functionally distinct roles for T and Tbx6 during mouse development5
Influence of maternal diet on offspring survivorship, growth, and reproduction in a sheetweb spider5
DNMT1 is a negative regulator of osteogenesis5
Light-sheet microscopy reveals dorsoventral asymmetric membrane dynamics ofAmoeba proteusduring pressure-driven locomotion4
Mapping the transcriptomic changes of endothelial compartment in human hippocampus across aging and mild cognitive impairment4
Genetically inducible and reversible zebrafish model of systemic inflammation4
Overexpression of Wnt7a enhances radiosensitivity of non-small-cell lung cancer via the Wnt/JNK pathway4
A node-based informed modularity strategy to identify organizational modules in anatomical networks4
Dissecting dynamics and differences of selective pressures in the evolution of human pigmentation4
Effects of mechanical stimulation on metabolomic profiles of SW1353 chondrocytes: shear and compression4
Tight junction stabilization prevents HepaRG cell death in drug-induced intrahepatic cholestasis4
Integrated analysis of cell shape and movement in moving frame4
Ctdp1 deficiency leads to early embryonic lethality in mice and defects in cell cycle progression in MEFs4
A new method to localise and quantify oxidative stress in live juvenile mussels4
Metabolic scaling of fire ants (Solenopsis invicta) engaged in collective behaviors4
What drives mixed-species shoaling among wild zebrafish? The roles of predators, food access, abundance of conspecifics and familiarity4
Investigating the effect of cholinergic and adrenergic blocking agents on maternal-fetal heart rates and their interactions in mice fetuses4
A Year at the Forefront of Bacterial Defense Systems Against Neutrophilic Oxidants4
Dorso-ventral heterogeneity in tracheal basal stem cells4
Modulation of mitochondrial nucleoid structure during aging and by mtDNA content in Drosophila4
The genomic basis of host and vector specificity in non-pathogenic trypanosomatids4
RNA-seq analysis and compound screening highlight multiple signalling pathways regulating secondary cell death after acute CNS injuryin vivo4
Interdomain interactions regulate the localization of a lipid transfer protein at ER-PM contact sites4
Pressure-induced changes on the morphology and gene expression in mammalian cells4
Initial parasitic behaviour of the temporary social parasitic ant Polyrhachis lamellidens can be induced by host-like cuticles in laboratory environment4
Chromatin dynamics through mouse preimplantation development revealed by single molecule localisation microscopy4
Quantitative evaluation of individual food intake by insectivorous vespertilionid bats (Chiroptera, Vespertilionidae)4
DJ-1 promotes epithelial-to-mesenchymal transition via enhancing FGF9 expression in colorectal cancer4
Insights into in vivo adipocyte differentiation through cell-specific labeling in zebrafish4
Single-cell sequencing reveals the potential oncogenic expression atlas of human iPSC-derived cardiomyocytes4
The thermal dependence and molecular basis of physiological color change in Takydromus septentrionalis (Lacertidae)4
Development of a cypovirus protein microcrystal-encapsulated Bacillus thuringiensis UV-tolerant and mosquitocidal δ-endotoxin4
Dirichlet process mixture models for single-cell RNA-seq clustering4
Zebrafish embryos hatch early in response to chemical and mechanical indicators of predation risk, resulting in underdeveloped swimming ability of hatchling larvae4
Arf GTPase-activating proteins SMAP1 and AGFG2 regulate the size of Weibel-Palade bodies and exocytosis of von Willebrand factor4
Minimal functional domains of the core polarity regulator Dlg4
Multiple neural bHLHs ensure the precision of a neuronal specification event in Caenorhabditis elegans4
Coilin as a regulator of NF-kB mediated inflammation in preeclampsia4
GRASP55 restricts early-stage autophagy and regulates spatial organization of the early secretory network4
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