Biology Open

Article	Citations
First person – Amy Irving	38
First person – Rajeshwari B. R.	35
First person – Kelly Diamond	28
First person – Yuta Koui	28
Gene expression and DNA methylation changes in response to hypoxia in toxicant-adapted Atlantic killifish (Fundulus heteroclitus)	24
First person – Flavie Ader	21
Knee position affects medial gastrocnemius and soleus activation during dynamic plantarflexion: no evidence for an inter-muscle compensation in healthy young adults	21
Three functional polymorphisms in CCDC170 were associated with osteoporosis phenotype	20
Regulation of NANOG and SOX2 expression by activin A and a canonical WNT agonist in bovine embryonic stem cells and blastocysts	20
Cellular signalling protrusions enable dynamic distant contacts in spinal cord neurogenesis	19
First person – Kayla Mills	19
Correction: IL-31 plays dual roles in lung inflammation in an OVA-induced murine asthma model	19
First person – Hungtang Ko	18
First person – Francesca Mastropasqua and Marika Oksanen	17
First person – Kazuko Okamoto	17
First person – Sophie Johnson	16
First person – Brandon Hastings	16
First person – Emily Harders	16
First person – Wanyue Xu	15
Sox8: a multifaceted transcription factor in development and disease	15
Locomotor kinematics on sand versus vinyl flooring in the sidewinder rattlesnake Crotalus cerastes	14
First person – Phuong Le and Jeanne Quinn	14
Short- and long-term exposure to high glucose induces unique transcriptional changes in osteoblasts in vitro	14
Progressive Palaeontology 2024 conference report	14
Pudgy mouse rib deformities emanate from abnormal paravertebral longitudinal cartilage/bone accumulations	12

Exploring stem cell frontiers: definitions, challenges, and perspectives for regenerative medicine	12
Tight junction stabilization prevents HepaRG cell death in drug-induced intrahepatic cholestasis	12
Cdc48 and its co-factor Ufd1 extract CENP-A from centromeric chromatin and can induce chromosome elimination in the fission yeast Schizosaccharomyces pombe	12
Data transformation and model selection in bivariate allometry	12
Auxin treatment increases lifespan in Caenorhabditis elegans	12
Spectral scanning and fluorescence lifetime imaging microscopy (FLIM) enable separation and characterization of C. elegans autofluorescence in the cuticle and gut	12
Intracellular dynamics of ubiquitin-like 3 visualized using an inducible fluorescent timer expression system	11
Glutaraldehyde-enhanced autofluorescence as a general tool for 3D morphological imaging	11
Oo-site: A dashboard to visualize gene expression during Drosophila oogenesis suggests meiotic entry is regulated post-transcriptionally	11
Over-expressing NadA quinolinate synthase inEscherichia colienhances the bioelectrochemistry in microbial fuel cells	11
Transgenic force sensors and software to measure force transmission across the mammalian nuclear envelope in vivo	11
Alpha-T-catenin is expressed in peripheral nerves as a constituent of Schwann cell adherens junctions	11
Developmental expression patterns of toolkit genes in male accessory gland ofDrosophilaparallels those of mammalian prostate	11
Divalent metal content in diet affects severity of manganese toxicity in Drosophila	11
Vitamin A cycle byproducts explain retinal damage and molecular changes thought to initiate retinal degeneration	11
An alternative and effective method for extracting skeletal organic matrix adapted to the red coral Corallium rubrum	10
A year at the forefront of plasmodesmal biology	10
Reevaluating the relationship between EGL-43 (EVI1) and LIN-12 (Notch) during C. elegans anchor cell invasion	10
Defective COX1 expression in aging mice liver	10
Plpp3, a novel regulator of pluripotency exit and endodermal differentiation of mouse embryonic stem cells	10
Exploiting the potential of lung stem cells to develop pro-regenerative therapies	10
FRS2-independent GRB2 interaction with FGFR2 is not required for embryonic development	9
Manipulation of the nuclear envelope-associated protein SLAP during mammalian brain development affects cortical lamination and exploratory behavior	9
Glucose to lactate shift reprograms CDK-dependent mitotic decisions and its communication with MAPK Sty1 in Schizosaccharomyces pombe	9
The transcriptional landscape of the cultured murine middle ear epithelium in vitro	9
Chromosomal organization of multigene families and meiotic analysis in species of Loricariidae (Siluriformes) from Brazilian Amazon, with description of a new cytotype for genus Spatuloricaria	9
10th European Calcium Society symposium: The Ca2+-signaling toolkit in cell function, health and disease	9
Optimization of an in situ liver perfusion method to evaluate hepatic function of juvenile American alligators (Alligator mississippiensis)	9
Influence of visual perception on movement decisions by an ungulate prey species	9
Visualization of the biphasic calcium wave during fertilization in Caenorhabditis elegans using a genetically encoded calcium indicator	9
Single target acuity for moving targets in the common sunfish (Lepomis gibbosus)	9
The LRRK2 signaling network converges on a centriolar phospho-Rab10/RILPL1 complex to cause deficits in centrosome cohesion and cell polarization	9
Mummichog gill and operculum exhibit functionally consistent claudin-10 paralog profiles and Claudin-10c hypersaline response	8
Early-career researchers: answering the most important scientific questions of our time	8
Apoptosis is a generator of Wnt-dependent regeneration and homeostatic cell renewal in the ascidian Ciona	8
Variations in oxidative stress and antioxidant defense level during different phases of hibernation in common Asian toad,Duttaphrynus melanostictus	8
Sequential events during the quiescence to proliferation transition establish patterns of follicle cell differentiation in the Drosophila ovary	8
miR-8b is involved in brain and eye regeneration ofDugesia japonicain head regeneration	8
Assessing metabolic rates in zebrafish using a 3D-printed intermittent-flow respirometer and swim tunnel system	8
Beyond barriers, towards diversity: how hybrid student conferences can drive accessibility	8
Short-range homing in camels: displacement experiments	8
Saccharomyces cerevisiae deficient in the early anaphase release of Cdc14 can traverse anaphase I without ribosomal DNA disjunction and successfully complete meiosis	8
Quantitative analysis of signaling responses during mouse primordial germ cell specification	8
The dorsal blastopore lip is a source of signals inducing planar cell polarity in the Xenopus neural plate	8
Macrophages allocate before apoptosis initiation and produce reactive oxygen species during interdigital phagocytosis	8
PatternJ: an ImageJ toolset for the automated and quantitative analysis of regular spatial patterns found in sarcomeres, axons, somites, and more	8
Zebrafish embryos hatch early in response to chemical and mechanical indicators of predation risk, resulting in underdeveloped swimming ability of hatchling larvae	8
Connecting different heart diseases through intercellular communication	7
Local adaptation in thermal tolerance for a tropical butterfly across ecotone and rainforest habitats	7
Unpredictable aggressive defence of the venomous snake, Crotalus ravus, towards predators and humans	7

The threat of a non-native oligochaete species in Iran's freshwater: Assessment of the diversity and origin of Eiseniella tetraedra (Savigny, 1826) and its response to climate change	7
Local differences in robustness to ocean acidification	7
First person – Jon Bell	7
exTREEmaTIME: a method for incorporating uncertainty into divergence time estimates	7
Presynaptic HCN channels constrain GABAergic synaptic transmission in pyramidal cells of the medial prefrontal cortex	7
First person – Daisy Pineda-Suazo	7
The extracellular matrix controls stem cell specification and crypt morphology in the developing and adult mouse gut	7
Patterns of variations in dorsal colouration of the Italian wall lizard Podarcis siculus	7
First person – Soyam Gupta	7
A hypomorphic mutation in Pold1 disrupts the coordination of embryo size expansion and morphogenesis during gastrulation	7
Antibodies targeting the European lobster (Palinurus elephas) vitellogenin developed by mRNA isolation and in-silico-designed antigenic peptides	7
The matrix in focus: new directions in extracellular matrix research from the 2021 ASMB hybrid meeting	7
Robust assembly of the aldehyde dehydrogenase Ald4p in Saccharomyces cerevisiae	7
Fast & Fair peer review: a bold experiment in scientific publishing	7
First person – Franziska Hacker	6
Promyelocytic leukemia nuclear body-like structures can assemble in mouse oocytes	6
An arch worth revisiting: a study on the feline humeral supracondylar foramen and its evolutionary significance	6
First person – J. Pablo Sánchez-Ovando	6
Retraction: MicroRNA-96-5p promotes proliferation, invasion and EMT of oral carcinoma cells by directly targeting FOXF2	6
Expression of Concern: MicroRNA-96-5p promotes proliferation, invasion and EMT of oral carcinoma cells by directly targeting FOXF2	6
First person – Marjan Abbasi	6
Correction: Stable atrogin-1 (Fbxo32) and MuRF1 (Trim63) gene expression is involved in the protective mechanism in soleus muscle of hibernating Daurian ground squirrels (<	6
First person – Daniel V. Guebel	6
Altered germline cyst formation and oogenesis in Tex14 mutant mice	6
First person – Julia Loose	6
Retraction: Overexpression of long non-coding RNA SBF2-AS1 promotes cell progression in esophageal squamous cell carcinoma (ESCC) by repressing miR-494 to up-regulate PFN2 expression	6
First person – Yao Xiao	6
First person – Yoshikazu Haramoto	6
Ccn2a acts downstream of cx43 to influence joint formation during zebrafish fin regeneration	6
Shaping the future of male reproductive health: fostering talent at the 14th Network of Young Researchers in Andrology meeting	6
Future leader to watch – Tania Martins-Marques	6
Future leader to watch – Roman Zug	6
Older 6-9-month-old spiny mice (Acomys cahirinus) have delayed and spatially heterogenous ear wound regeneration	6
Population-level antagonism between FGF and BMP signaling steers mesoderm differentiation in embryonic stem cells	6
First person – Justin Varholick	6
Deciphering the flapping frequency allometry: unveiling the role of sustained body attitude in the aerodynamic scaling of normal hovering animals	6
The story of Biology Open: a conversation with past and present Editors-in-Chief	6
First person – Yixing Wu and Ying Bai	6
Future leader to watch – Gregory Redpath	6
First person – Ming-Hsuan Wen	6
Correction: IRS-1 increases TAZ expression and promotes osteogenic differentiation in rat bone marrow mesenchymal stem cells	6
First person – Taisa Bohdanovych	6
Development of a cypovirus protein microcrystal-encapsulated Bacillus thuringiensis UV-tolerant and mosquitocidal δ-endotoxin	5
Identification of a new allele of O-fucosyltransferase 1 involved in Drosophila intestinal stem cell regulation	5
The genomic basis of host and vector specificity in non-pathogenic trypanosomatids	5
Palmitoylated small GTPase ARL15 is translocated within Golgi network during adipogenesis	5
Serotonin: an overlooked regulator of endocytosis and endosomal sorting?	5
Suction feeding of West African lungfish (Protopterus annectens): An XROMM analysis of jaw mechanics, cranial kinesis, and hyoid mobility	5
Cytoneme-like protrusion formation induced by LAR is promoted by receptor dimerization	5
Odours of cancerous mouse congeners: detection and attractiveness	5
Chk2-p53 and JNK in irradiation-induced cell death of hematopoietic progenitors and differentiated cells inDrosophilalarval lymph gland	5
A nematode-derived, mitochondrial stress signaling-regulated peptide exhibits broad antibacterial activity	5
Beyond bold versus shy: Zebrafish exploratory behavior falls into several behavioral clusters and is influenced by strain and sex	5
shRNAs targeting mouseAdam10diminish cell response to proinflammatory stimuli independently ofAdam10silencing	5
The population frequency of human mitochondrial DNA variants is highly dependent upon mutational bias	5
NEDD1-S411 phosphorylation plays a critical function in the coordination of microtubule nucleation during mitosis	5
First person – Alice Yuen	5
An experimental test of chronic traffic noise exposure on parental behaviour and reproduction in zebra finches	5
A deep-dive into fictive locomotion – a strategy to probe cellular activity during speed transitions in fictively swimming zebrafish larvae	5
The importance of considering regulatory domains in genome-wide analyses – the nearest gene is often wrong!	5
Expression levels and activities of energy-yielding ATPases in the oligohaline neritid snail Theodoxus fluviatilis under changing environmental salinities	5
Inter- and intra-limb coordination during initial sprint acceleration	5
midline represses Dpp signaling and target gene expression in Drosophila ventral leg development	5
Myotonic dystrophy type 1 embryonic stem cells show decreased myogenic potential, increased CpG methylation at the DMPK locus and RNA mis-splicing	5
A human stem cell resource to decipher the biochemical and cellular basis of neurodevelopmental defects in Lowe syndrome	5
Novel protocol to observe the intestinal tuft cell using transmission electron microscopy	5
Rhoptry kinase protein 39 (ROP39) is a novel factor that recruits host mitochondria to the parasitophorous vacuole of Toxoplasma gondii	5
Drosophila CRISPR/Cas9 mutants as tools to analyse cardiac filamin function and pathogenicity of human FLNC variants	5
Modest sexual size dimorphism and allometric growth: a study based on growth and gonad development in the wolf spider Pardosa pseudoannulata (Araneae: Lycosidae)	5
Clonal behaviour of myogenic precursor cells throughout the vertebrate lifespan	5
EFEMP1 contributes to light-dependent ocular growth in zebrafish	4
Tbx5 overexpression in embryoid bodies increases TAK1 expression but does not enhance the differentiation of sinoatrial node cardiomyocytes	4
The Endosomal Sorting Complex, ESCRT, has diverse roles in blood progenitor maintenance, lineage choice and immune response	4
Clearance rates of sand-burrowed and laterally pressed unburrowed Pismo clam Tivela stultorum (Mawe 1823) in a laboratory open-flow system	4
NANOS3 suppresses premature spermatogonial differentiation to expand progenitors and fine-tunes spermatogenesis in mice	4
Clutch may predict growth of hatchling Burmese pythons better than food availability or sex	4
Energetics of whiskered bats in comparison to other bats of the family Vespertilionidae	4
An ode to multidisciplinarity: the ‘Bacteria Orchestrate Life’ international meeting	4
The lymphatic system favours survival of a unique T. brucei population	4
Ac/Ds transposition for CRISPR/dCas9-SID4x epigenome modulation in zebrafish	4

Air–liquid interface culture combined with differentiation factors reproducing intestinal cell structure formation in vitro	4
The fission yeast SUMO-targeted ubiquitin ligase Slx8 functionally associates with clustered centromeres and the silent mating-type region at the nuclear periphery	4
The influence of carbon dioxide on cerebral metabolism and oxygen consumption: combining multimodal monitoring with dynamic systems modelling	4
Postnatal depletion of maternal cells biases T lymphocytes and natural killer cells’ profiles toward early activation in the spleen	4
Neural stem cell research in Africa: current realities and future prospects	4
An ethogram identifies behavioural markers of attention to humans in European herring gulls (Larus argentatus)	4
Efficient genome editing using modified Cas9 proteins in zebrafish	4
A Year at the Forefront of Gliding Locomotion	4
Introducing Daniel Gorelick – a new Editor-in-Chief for Biology Open	4
Young minds, deeper insights: a recap of the BMAS Summer School 2023, ranging from basic research to clinical implications of bone marrow adipose tissue	4
BBQ methods: streamlined workflows for bacterial burden quantification in infected cells by confocal microscopy	4
Mitochondrial metabolism in Drosophila macrophage-like cells regulates body growth via modulation of cytokine and insulin signaling	4
Potentiating Vγ9Vδ2 T cell proliferation and assessing their cytotoxicity towards adherent cancer cells at the single cell level	4
Focal sources of FGF-10 promote the buckling morphogenesis of the embryonic airway epithelium	4
Microbiome transplants may not improve health and longevity in Drosophila melanogaster	4
The relationship between locomotion and hindlimb morphology in the leopard (Panthera pardus) using a geometric morphometric approach	4