OOIR: Observatory of International Research

Papers

(The H4-Index of GigaScience is 27. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-10-01 to 2025-10-01.)

Article	Citations
Reducing skin microbiome exposure impacts through swine farm biosecurity	255
Hecatomb: an integrated software platform for viral metagenomics	96
The probability of edge existence due to node degree: a baseline for network-based predictions	87
The curse and blessing of abundance—the evolution of drug interaction databases and their impact on drug network analysis	79
3D-Beacons: decreasing the gap between protein sequences and structures through a federated network of protein structure data resources	68
ntsm: an alignment-free, ultra-low-coverage, sequencing technology agnostic, intraspecies sample comparison tool for sample swap detection	63
Protein–protein and protein–nucleic acid binding site prediction via interpretable hierarchical geometric deep learning	61
MBGC: Multiple Bacteria Genome Compressor	52
Democratizing data-independent acquisition proteomics analysis on public cloud infrastructures via the Galaxy framework	51
DivBrowse—interactive visualization and exploratory data analysis of variant call matrices	49
Current status of global conservation and characterisation of wild and cultivated Brassicaceae genetic resources	48
X-ray microtomography imaging of craniofacial hard tissues in selected reptile species with different types of dentition	38
A Case for estradiol: younger brains in women with earlier menarche and later menopause	38
scMAPA: Identification of cell-type–specific alternative polyadenylation in complex tissues	37
FAIR data station for lightweight metadata management and validation of omics studies	35
Dual-Alpha: a large EEG study for dual-frequency SSVEP brain–computer interface	35
The Nencki-Symfonia electroencephalography/event-related potential dataset: Multiple cognitive tasks and resting-state data collected in a sample of healthy adults	35
A decade of GigaScience: A perspective on conservation genetics	34
A high-quality, long-read genome assembly of the endangered ring-tailed lemur (Lemur catta)	33
Correction to: Antibiotic resistance genes are differentially mobilized according to resistance mechanism	32
Qiber3D—an open-source software package for the quantitative analysis of networks from 3D image stacks	31
CODARFE: Unlocking the prediction of continuous environmental variables based on microbiome	31
ricu: R’s interface to intensive care data	29
CoVEffect: interactive system for mining the effects of SARS-CoV-2 mutations and variants based on deep learning	28
WaveSeekerNet: accurate prediction of influenza A virus subtypes and host source using attention-based deep learning	28

Cellsnake: a user-friendly tool for single-cell RNA sequencing analysis	28
Harnessing population diversity: in search of tools of the trade	27
Characteristics and filtering of low-frequency artificial short deletion variations based on nanopore sequencing	27
A virtual library for behavioral performance in standard conditions—rodent spontaneous activity in an open field during repeated testing and after treatment with drugs or brain lesions	27
Galaxy as a gateway to bioinformatics: Multi-Interface Galaxy Hands-on Training Suite (MIGHTS) for scRNA-seq	27
gNOMO2: a comprehensive and modular pipeline for integrated multi-omics analyses of microbiomes	27