OOIR: Observatory of International Research

Papers

(The median citation count of Microscopy is 1. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-04-01 to 2025-04-01.)

Article	Citations
In This Issue	38
In This Issue	30
Correction to: Electron microscopic visualization of single molecules by tag-mediated metal particle labeling	28
Retraction of: The presence of perforated synapses in the striatum after dopamine depletion, is this a sign of maladaptive brain plasticity?	26
A guide to CNN-based dense segmentation of neuronal EM images	24
Editorial: In-situ microscopy	20
Segmented ring-mesh model of glycosaminoglycan chains based on the 3D analysis of normal individual and musculocontractural Ehlers–Danlos syndrome skin using scanning transmission electron microscopy	20
Measurement and correction of TEM image distortion using arbitrary samples	20
In This Issue	20
Noise reduction of low-dose electron holograms using the wavelet hidden Markov model	19
Nanoscale visualization of crack tips inside molten corium–concrete interaction debris using 3D-FIB-SEM with multiphase positional misalignment correction	18
In This Issue	15
In This Issue	15
Structures of multisubunit membrane complexes with the CRYO ARM 200	14
Correlative light and volume electron microscopy to study brain development	13
Development of temporal series 4D-STEM and application to relaxation time measurement	13
Observations of nemaline bodies in muscle biopsies of critically ill patients infected with SARS-CoV-2	11
Model-based deconvolution for particle analysis applied to a through-focus series of HAADF-STEM images	11
In situ pulsed electrical biasing TEM observation of AA7075	10
Renewal of the Microscopy Editorial Board	10
Toward quantitative super-resolution microscopy: molecular maps with statistical guarantees	10
Chlamydia psittaci infected cell studies by 4Pi Raman and atomic force microscopy	9
Total third-degree variation for noise reduction in atomic-resolution STEM images	8
In-situ shearing process observation system for soft materials via transmission electron microscopy	8
Unlocking the potential of large-scale 3D imaging with tissue clearing techniques	8

Effective alignment method using a diamond notch knife for correlative array tomography	8
Near-field electron ptychography using full-field structured illumination	7
Development of a gas environmental heating specimen holder system using differential pumping	7
Electron transfer in LiMn1.5Ni0.5O4 during charging studied with soft X-ray spectrometry	7
Study of high–low KPFM on a pn-patterned Si surface	7
Toward complex observation in electron microscopy using two-dimensional electron detector coupled with phase plate STEM	7
Super-resolution reconstruction based on BM3D and compressed sensing	7
Editorial: Virus Microscopy	6
Axonal regrowth under release of myelin-associated glycoprotein: chemotaxis by pioneer Schwann cells and Cajal’s gigantic clubs	6
Detection of autophagy-related structures in fruiting bodies of edible mushroom, Pleurotus ostreatus	6
Machine-learning-based quality-level-estimation system for inspecting steel microstructures	6
Basic properties of solidified organic liquids at a cryogenic temperature for electron microscopic visualization and sample preparation of dispersion systems	5
Momentum-resolved EELS and CL study on 1D-plasmonic crystal prepared by FIB method	5
Electron holography observation of electron spin polarization around charged insulating wire	5
Cryo-EM performance testing of hardware and data acquisition strategies	4
Resolution improvement of differential phase-contrast microscopy via tilt-series acquisition for environmental cell application	4
Development of tilt-scan system for differential phase contrast scanning transmission electron microscopy	4
Ultrastructural characteristics of finger-like membrane protrusions in cell competition	4
Nondestructive initial-profile-free 3D elemental mapping in multilayer thin film structures based on EDX and a quadratic programming problem	4
In This Issue	4
In This Issue	4
Correction to: Microstructural observation of casein micelles in milk by cryo-electron microscopy of vitreous sections (CEMOVIS)	4
Optimization of method for cross-section hydrogels preparation using high-pressure freezing	4
A novel technique of STEM observation of TEM section using LVSEM and application of pathological diagnosis of renal biopsy	4
Correction to: Estimation of projection parameter distribution and initial model generation in single-particle analysis	4
Prediction of secondary electron yield for metal materials using deep learning	4
Three-dimensional electron tomography and recent expansion of its applications in materials science	4
Comparison of large-volume 3D reconstruction using plasma FIB-SEM and X-ray CT	4
Correction to: Glutaraldehyde and uranyl acetate dual fixation combined sputtering/unroofing enables intracellular fatty acids TOF-SIMS imaging with organelle-corresponding subcellular distribution	4
Correction to: Electron holography observation of electron spin polarization around charged insulating wire	4
Low-aberration ExB deflector optics for scanning electron microscopy	3
Reliable electrochemical setup for in situ observations with an atmospheric SEM	3
A specific technique of immunolabelling of urinary small extracellular vesicle biomarkers for the diagnostic of renal cancer	3
Appressed, directed and silicified trichomes of the kudzu climbing vine	3
A tool for live-cell confocal imaging of temperature-dependent organelle dynamics	3
Analysis of spatial point patterns in electron-counting images	3
A functional platform for remote use of electron microscopes using web conferencing systems	3
Effect of amorphous carbon coating on the performance of liquid phase transmission electron microscopy (LP-TEM) and the dynamics of enclosed Pt nano-colloids	3
Structural and electronic characterization of fluorine-doped La0.5Sr0.5CoO3−δ using electron energy-loss spectroscopy	3
Simultaneous observation of multiple interferograms with Mach-Zehnder type electron interferometer on a 1.2-MV field-emission transmission electron microscope	3
Protein–lipid interplay at the neuromuscular junction	3
Mesoscopic structural analysis via deep learning processing, with a special reference to in vitro alteration in collagen fibre induced by a gap junction inhibitor	3
Correlative volume-imaging using combined array tomography and FIB-SEM tomography with beam deceleration for 3D architecture visualization in tissue	3
Enhancing performance of electron holography with mathematical and machine learning–based denoising techniques	3
Three-dimensional visualization of plant tissues and organs by X-ray micro–computed tomography	3
Identifying proteins in the cell by tagging techniques for cryo-electron microscopy	2
Phase retrieval of electron rocking curves using total variation and total squared variation regularizations	2
Time-resolved electron holography and its application to an ionic liquid specimen	2
Glutaraldehyde and uranyl acetate dual fixation combined sputtering/unroofing enables intracellular fatty acids TOF-SIMS imaging with organelle-corresponding subcellular distribution	2
Study on the dissolution of β-precipitates in the Zr–1Nb alloy under the influence of Ne ion irradiation	2

Different atomic contrasts in HAADF images and EELS maps of rutile TiO2	2
Self-absorption effect in soft X-ray emission spectra utilized for bandgap evaluation of semiconductors	2
Kelvin probe force microscopy for material characterization	2
Visualization of Arabidopsis root system architecture in 3D by refraction-contrast X-ray micro-computed tomography	2
Bioimaging of glucose analogs labeled at the C-1 or C-2 position with a fluorescent dansylamino group	2
Three-dimensional structure analysis of mouse nails using synchrotron radiation	2
Development of silicon-on-insulator direct electron detector with analog memories in pixels for sub-microsecond imaging	2
Advances in fluorescence microscopy for orthohantavirus research	2
Data-driven electron microscopy: electron diffraction imaging of materials structural properties	2
Three-dimensionally visualized rhizoid system of moss, Physcomitrium patens, by refraction-contrast X-ray micro-computed tomography	2
Evolution in X-ray analysis from micro to atomic scales in aberration-corrected scanning transmission electron microscopes	2
Lorentz scanning electron/ion microscopy	2
Deciphering prefrontal circuits underlying stress and depression: exploring the potential of volume electron microscopy	2
In This Issue	2
In This Issue	2
Distribution of amniotic stem cells in human term amnion membrane	2
Quadruple node of triple junctions of grain boundaries in a Eu2+-doped solid solution of the ions K+, Rb+, Cl− and Br−: an epifluorescence microscopy study using the doping ion as a fluorochrome	2
Single-molecule localization microscopy based on denoising, interpolation and local maxima	2
Recent advances in in-resin correlative light and electron microscopy of Epon-embedded cells	2
Scanning electron microscopy of Escherichia coli encapsulated in a spacerized graphene sandwich	2
In This Issue	1
In situ TEM studies on hydrogen-related issues: hydrogen storage, hydrogen embrittlement, fuel cells and electrolysis	1
Simultaneous secondary electron microscopy in the scanning transmission electron microscope with applications for in situ studies	1
Perspective and prospects of in situ transmission/scanning transmission electron microscopy	1
In This Issue	1
Electron microscopic visualization of single molecules by tag-mediated metal particle labeling	1
Design and fabrication of an electrochemical chip for liquid-phase transmission electron microscopy	1
Application of Hilbert-differential phase contrast to scanning transmission electron microscopy	1
The Third Japan–Canada Microscopy Societies Joint Symposium 2022	1
Surface sensitivity of atomic-resolution secondary electron imaging	1
Analyzing the synchronism of stacking-fault formation in side-by-side SiC nanowire pairs using the Levenshtein distance: stochastic versus deterministic processes	1
Evaluating the roughness dynamics of kefir biofilms grown on Amazon cupuaçu juice: a monofractal and multifractal approach	1
Low-dose measurement of electric potential distribution in organic light-emitting diode by phase-shifting electron holography with 3D tensor decomposition	1
Analytical technique for self-absorption structure of iron L-emission spectra obtained by soft X-ray emission spectrometer	1
3D mesoscopic architecture of a heterogeneous cellular network in the cementum–periodontal ligament–alveolar bone complex	1
A novel embedding composition for the evaluation of the internal structure of carbon materials using electron microscopy	1
Fast computational approach with prior dimension reduction for three-dimensional chemical component analysis using CT data of spectral imaging	1
In This Issue	1
Fine cryo-SEM observation of the microstructure of emulsions frozen via high-pressure freezing	1
Hybrid mode atomic force microscopy of phase modulation and frequency modulation	1
Spatial resolution in secondary-electron microscopy	1
Extraction of phase information approximating the demagnetization field within a thin-foiled magnet using electron holography observation	1
Tight-junction strand networks and tightness of the epithelial barrier	1
In situ observation of the chemical bonding state of Si in the molten state of eutectic Au–Si alloy of Au81Si19 by using a soft X-ray emission spectroscopy electron microscope	1
Development of a localized surface plasmon–enhanced electron beam–pumped nanoscale light source for electron beam excitation–assisted optical microscopy	1
Removal of phase residues in electron holography	1
Attosecond electron-beam technology: a review of recent progress	1
A wide variety of techniques for a volume electron microscopy	1
Bayesian inference of atomic column positions in scanning transmission electron microscopy images	1
Role of lipids in the organization of tight junction	1
Simple derivation of L-absorption spectra of 3d transition metal elements by the self-absorption effect observed in soft X-ray emission spectra	1
Physical Basics of Scanning Electron Microscopy in Volume Electron Microscopy	1
Three-dimensional nanostructure analysis of non-stained Nafion in fuel-cell electrode by combined ADF-STEM tomography	1
Using a novel CLEM system to localize lipid droplets and membranes in desiccated embryonic axis cells of soybean seeds	1
In-situ heating-and-electron tomography for materials research: from 3D (in-situ 2D) to 4D (in-situ 3D)	1
Correction to: Advances in fluorescence microscopy for orthohantavirus research	1
Correction to: High-resolution and analytical electron microscopy in a liquid flow cell via gas purging	1
Diffraction contrast of ferroelectric domains in DPC STEM images	1
Optical microscopic imaging, manipulation, and analysis methods for morphogenesis research	1
Encapsulation, vacuolation and phagocytosis of the opportunistic fungal pathogen Cryptococcus in the liver of an immunocompetent host	1