Scientific Data

Article	Citations
The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data	625
County-level CO2 emissions and sequestration in China during 1997–2017	445
PTB-XL, a large publicly available electrocardiography dataset	359
A cross-country database of COVID-19 testing	336
A harmonized global nighttime light dataset 1992–2018	242
MIMIC-IV, a freely accessible electronic health record dataset	240
Dynamic World, Near real-time global 10 m land use land cover mapping	238
HyperKvasir, a comprehensive multi-class image and video dataset for gastrointestinal endoscopy	211
Materials Cloud, a platform for open computational science	191
COVID-19 outbreak response, a dataset to assess mobility changes in Italy following national lockdown	190
The World Checklist of Vascular Plants, a continuously updated resource for exploring global plant diversity	189
Holocene global mean surface temperature, a multi-method reconstruction approach	188
Bias-corrected climate projections for South Asia from Coupled Model Intercomparison Project-6	178
A patient-centric dataset of images and metadata for identifying melanomas using clinical context	172
InvaCost, a public database of the economic costs of biological invasions worldwide	166
Version 3 of the Global Aridity Index and Potential Evapotranspiration Database	161
The TRUST Principles for digital repositories	160
Highly accurate long-read HiFi sequencing data for five complex genomes	155
The COUGHVID crowdsourcing dataset, a corpus for the study of large-scale cough analysis algorithms	150
Outlining where humans live, the World Settlement Footprint 2015	145
Systematic phenotyping and characterization of the 5xFAD mouse model of Alzheimer’s disease	144
The 10-m crop type maps in Northeast China during 2017–2019	144
AiiDA 1.0, a scalable computational infrastructure for automated reproducible workflows and data provenance	142
The human O-GlcNAcome database and meta-analysis	140
The International Bathymetric Chart of the Arctic Ocean Version 4.0	139

Multiscale dynamic human mobility flow dataset in the U.S. during the COVID-19 epidemic	137
A structured open dataset of government interventions in response to COVID-19	124
A global-scale data set of mining areas	119
NASA Global Daily Downscaled Projections, CMIP6	118
Carbon Monitor, a near-real-time daily dataset of global CO2 emission from fossil fuel and cement production	114
Data sharing practices and data availability upon request differ across scientific disciplines	109
Operationalizing the CARE and FAIR Principles for Indigenous data futures	108
COVID-CT-MD, COVID-19 computed tomography scan dataset applicable in machine learning and deep learning	107
The ANI-1ccx and ANI-1x data sets, coupled-cluster and density functional theory properties for molecules	105
MedMNIST v2 - A large-scale lightweight benchmark for 2D and 3D biomedical image classification	101
Global 1 km × 1 km gridded revised real gross domestic product and electricity consumption during 1992–2019 based on calibrated nighttime light data	99
A global record of annual terrestrial Human Footprint dataset from 2000 to 2018	98
Global land use for 2015–2100 at 0.05° resolution under diverse socioeconomic and climate scenarios	95
Building a PubMed knowledge graph	94
Kvasir-Capsule, a video capsule endoscopy dataset	90
High-throughput screening platform for solid electrolytes combining hierarchical ion-transport prediction algorithms	90
The Building Data Genome Project 2, energy meter data from the ASHRAE Great Energy Predictor III competition	89
Gridded daily weather data for North America with comprehensive uncertainty quantification	88
VinDr-CXR: An open dataset of chest X-rays with radiologist’s annotations	84
A global map of terrestrial habitat types	83
Bias-corrected CMIP6 global dataset for dynamical downscaling of the historical and future climate (1979–2100)	83
A high-resolution in vivo magnetic resonance imaging atlas of the human hypothalamic region	82
A database of battery materials auto-generated using ChemDataExtractor	82
GlobalFungi, a global database of fungal occurrences from high-throughput-sequencing metabarcoding studies	81
Introducing the FAIR Principles for research software	77
ERA5-based global meteorological wildfire danger maps	75
K-EmoCon, a multimodal sensor dataset for continuous emotion recognition in naturalistic conversations	74
COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms	74
High-resolution monthly precipitation and temperature time series from 2006 to 2100	74
Geomorpho90m, empirical evaluation and accuracy assessment of global high-resolution geomorphometric layers	73
Global quantitative analysis of the human brain proteome and phosphoproteome in Alzheimer’s disease	73
Reactants, products, and transition states of elementary chemical reactions based on quantum chemistry	73
AusTraits, a curated plant trait database for the Australian flora	72
PERSIANN-CCS-CDR, a 3-hourly 0.04° global precipitation climate data record for heavy precipitation studies	72
COVIDiSTRESS Global Survey dataset on psychological and behavioural consequences of the COVID-19 outbreak	71
Global terrestrial carbon fluxes of 1999–2019 estimated by upscaling eddy covariance data with a random forest	71
Large eQTL meta-analysis reveals differing patterns between cerebral cortical and cerebellar brain regions	69
CIDO, a community-based ontology for coronavirus disease knowledge and data integration, sharing, and analysis	69
Chinese provincial multi-regional input-output database for 2012, 2015, and 2017	68
The Amsterdam Open MRI Collection, a set of multimodal MRI datasets for individual difference analyses	68
Thermodynamic and transport properties of hydrogen containing streams	68
DISPERSE, a trait database to assess the dispersal potential of European aquatic macroinvertebrates	67
HIT-COVID, a global database tracking public health interventions to COVID-19	66
Building a knowledge graph to enable precision medicine	65
Combining expert and crowd-sourced training data to map urban form and functions for the continental US	64
Estimating nitrogen and phosphorus concentrations in streams and rivers, within a machine learning framework	64
A SARS-CoV-2 cytopathicity dataset generated by high-content screening of a large drug repurposing collection	63
A database of human gait performance on irregular and uneven surfaces collected by wearable sensors	63
An automatic multi-tissue human fetal brain segmentation benchmark using the Fetal Tissue Annotation Dataset	63
Hourly potential evapotranspiration at 0.1° resolution for the global land surface from 1981-present	62

National contributions to climate change due to historical emissions of carbon dioxide, methane, and nitrous oxide since 1850	61
Systematic analysis of infectious disease outcomes by age shows lowest severity in school-age children	60
A synthesis of bacterial and archaeal phenotypic trait data	60
Coastal sea level anomalies and associated trends from Jason satellite altimetry over 2002–2018	58
Global high-resolution emissions of soil NOx, sea salt aerosols, and biogenic volatile organic compounds	58
GlobSnow v3.0 Northern Hemisphere snow water equivalent dataset	57
Expanded dataset of mechanical properties and observed phases of multi-principal element alloys	57
Mapping twenty years of corn and soybean across the US Midwest using the Landsat archive	57
Gridded fossil CO2 emissions and related O2 combustion consistent with national inventories 1959–2018	56
A naturalistic neuroimaging database for understanding the brain using ecological stimuli	56
ClimateEU, scale-free climate normals, historical time series, and future projections for Europe	56
Downscaling GRACE total water storage change using partial least squares regression	55
CT-ORG, a new dataset for multiple organ segmentation in computed tomography	55
GEOM, energy-annotated molecular conformations for property prediction and molecular generation	55
Publisher Correction: Present and future Köppen-Geiger climate classification maps at 1-km resolution	54
Global monthly gridded atmospheric carbon dioxide concentrations under the historical and future scenarios	54
Quantum chemical calculations for over 200,000 organic radical species and 40,000 associated closed-shell molecules	53
Multivariate time series dataset for space weather data analytics	53
COVID-19 pandemic reveals the peril of ignoring metadata standards	53
Global soil moisture data derived through machine learning trained with in-situ measurements	52
Author Correction: The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data	52
Global daily 1 km land surface precipitation based on cloud cover-informed downscaling	51
High-resolution terrestrial climate, bioclimate and vegetation for the last 120,000 years	51
Local sea level trends, accelerations and uncertainties over 1993–2019	50
Air pollution emissions from Chinese power plants based on the continuous emission monitoring systems network	50
Comprehensive dataset of shotgun metagenomes from oxygen stratified freshwater lakes and ponds	50
FIVES: A Fundus Image Dataset for Artificial Intelligence based Vessel Segmentation	50
Harmonised LUCAS in-situ land cover and use database for field surveys from 2006 to 2018 in the European Union	50
OPTIMADE, an API for exchanging materials data	50
A global dataset of surface water and groundwater salinity measurements from 1980–2019	49
LCVP, The Leipzig catalogue of vascular plants, a new taxonomic reference list for all known vascular plants	49
Mapping of 30-meter resolution tile-drained croplands using a geospatial modeling approach	49
A multi-site, multi-disorder resting-state magnetic resonance image database	49
An open tool for creating battery-electric vehicle time series from empirical data, emobpy	48
Electrochemical metrics for corrosion resistant alloys	47
QM7-X, a comprehensive dataset of quantum-mechanical properties spanning the chemical space of small organic molecules	47
A dataset of clinically recorded radar vital signs with synchronised reference sensor signals	46
Creation and validation of a chest X-ray dataset with eye-tracking and report dictation for AI development	46
A new comprehensive trait database of European and Maghreb butterflies, Papilionoidea	45
A long term global daily soil moisture dataset derived from AMSR-E and AMSR2 (2002–2019)	45
BAGLS, a multihospital Benchmark for Automatic Glottis Segmentation	45
Lower-limb kinematics and kinetics during continuously varying human locomotion	45
The green and blue crop water requirement WATNEEDS model and its global gridded outputs	44
Fetal electrocardiograms, direct and abdominal with reference heartbeat annotations	44
An annotated fluorescence image dataset for training nuclear segmentation methods	44
CAVD, towards better characterization of void space for ionic transport analysis	44
Response2covid19, a dataset of governments’ responses to COVID-19 all around the world	43
China’s greenhouse gas emissions for cropping systems from 1978–2016	43
CU-BEMS, smart building electricity consumption and indoor environmental sensor datasets	42
A curated diverse molecular database of blood-brain barrier permeability with chemical descriptors	42
LoDoPaB-CT, a benchmark dataset for low-dose computed tomography reconstruction	42
CerebrA, registration and manual label correction of Mindboggle-101 atlas for MNI-ICBM152 template	42
The “Narratives” fMRI dataset for evaluating models of naturalistic language comprehension	42
Development and validation of the CHIRTS-daily quasi-global high-resolution daily temperature data set	42
Benchmark maps of 33 years of secondary forest age for Brazil	42
A new global dataset of bioclimatic indicators	42
Experimental database of optical properties of organic compounds	41
Global spatiotemporally continuous MODIS land surface temperature dataset	41
Electronic healthcare records and external outcome data for hospitalized patients with heart failure	41
Genetic variation among 481 diverse soybean accessions, inferred from genomic re-sequencing	41
A multi-modal open dataset for mental-disorder analysis	40
A new vector-based global river network dataset accounting for variable drainage density	40
A taxonomic, genetic and ecological data resource for the vascular plants of Britain and Ireland	40
A band-gap database for semiconducting inorganic materials calculated with hybrid functional	40
lncRNAKB, a knowledgebase of tissue-specific functional annotation and trait association of long noncoding RNA	40
Vectorized rooftop area data for 90 cities in China	39
Worldwide continuous gap-filled MODIS land surface temperature dataset	39
An integrated landscape of protein expression in human cancer	39
QMugs, quantum mechanical properties of drug-like molecules	39
Heidelberg colorectal data set for surgical data science in the sensor operating room	39
Global land projection based on plant functional types with a 1-km resolution under socio-climatic scenarios	38
Probabilistic atlas for the language network based on precision fMRI data from >800 individuals	38
A global occurrence database of the Atlantic blue crab Callinectes sapidus	38
Developing reliable hourly electricity demand data through screening and imputation	38
16 years of topographic surveys of rip-channelled high-energy meso-macrotidal sandy beach	38
A global dataset for the projected impacts of climate change on four major crops	38
TILES-2018, a longitudinal physiologic and behavioral data set of hospital workers	38
A database of chlorophyll and water chemistry in freshwater lakes	38
An update on global mining land use	38
Discharge profile of a zinc-air flow battery at various electrolyte flow rates and discharge currents	37

The United States COVID-19 Forecast Hub dataset	37
Greenhouse gas emissions from municipal wastewater treatment facilities in China from 2006 to 2019	37
A Global Building Occupant Behavior Database	37
High-resolution Digital Surface Model of the 2021 eruption deposit of Cumbre Vieja volcano, La Palma, Spain	36
Design and evaluation of a data anonymization pipeline to promote Open Science on COVID-19	36
Long-term and large-scale multispecies dataset tracking population changes of common European breeding birds	36
MOFSimplify, machine learning models with extracted stability data of three thousand metal–organic frameworks	36
A rasterized building footprint dataset for the United States	36
The normalised Sentinel-1 Global Backscatter Model, mapping Earth’s land surface with C-band microwaves	35
In vivo human whole-brain Connectom diffusion MRI dataset at 760 µm isotropic resolution	35
Global gridded GDP data set consistent with the shared socioeconomic pathways	35
Dataset of segmented nuclei in hematoxylin and eosin stained histopathology images of ten cancer types	35
A multilevel carbon and water footprint dataset of food commodities	35
A high-resolution climate simulation dataset for the past 540 million years	34
Global forest management data for 2015 at a 100 m resolution	34
An Indo-Pacific coral spawning database	34
A comprehensive, multisource database for hydrometeorological modeling of 14,425 North American watersheds	34
Quantum chemical benchmark databases of gold-standard dimer interaction energies	34
A gene expression atlas for different kinds of stress in the mouse brain	34
Benchmarking second and third-generation sequencing platforms for microbial metagenomics	34
Validation and refinement of cropland data layer using a spatial-temporal decision tree algorithm	34
A high-spatial-resolution dataset of human thermal stress indices over South and East Asia	34
Global offshore wind turbine dataset	33
Lower limb kinematic, kinetic, and EMG data from young healthy humans during walking at controlled speeds	33
p3k14c, a synthetic global database of archaeological radiocarbon dates	33
The OceanDNA MAG catalog contains over 50,000 prokaryotic genomes originated from various marine environments	33
VitalDB, a high-fidelity multi-parameter vital signs database in surgical patients	33
A map of the extent and year of detection of oil palm plantations in Indonesia, Malaysia and Thailand	33
A relational database to identify differentially expressed genes in the endometrium and endometriosis lesions	33
Unravelling the diversity of magnetotactic bacteria through analysis of open genomic databases	33
The global lake area, climate, and population dataset	33
A large, curated, open-source stroke neuroimaging dataset to improve lesion segmentation algorithms	32
SAVI, in silico generation of billions of easily synthesizable compounds through expert-system type rules	32
A whole-body FDG-PET/CT Dataset with manually annotated Tumor Lesions	32
Segmentation of vestibular schwannoma from MRI, an open annotated dataset and baseline algorithm	32
A dataset of remote-sensed Forel-Ule Index for global inland waters during 2000–2018	32
Genome assembly and annotation of Meloidogyne enterolobii, an emerging parthenogenetic root-knot nematode	32
The Swiss data cube, analysis ready data archive using earth observations of Switzerland	32
Global trends and forecasts of breast cancer incidence and deaths	31
Reef Cover, a coral reef classification for global habitat mapping from remote sensing	31
Publisher Correction: A global database of Holocene paleotemperature records	31
Crop production and nitrogen use in European cropland and grassland 1961–2019	31
Monthly direct and indirect greenhouse gases emissions from household consumption in the major Japanese cities	31
A completely annotated whole slide image dataset of canine breast cancer to aid human breast cancer research	31
Caravan - A global community dataset for large-sample hydrology	30
Chest imaging representing a COVID-19 positive rural U.S. population	30
A harmonised, high-coverage, open dataset of solar photovoltaic installations in the UK	30
Human and economic impacts of natural disasters: can we trust the global data?	30
Inflation of test accuracy due to data leakage in deep learning-based classification of OCT images	30
Global data on fertilizer use by crop and by country	30
A kinematic and kinetic dataset of 18 above-knee amputees walking at various speeds	30
A global 0.05° dataset for gross primary production of sunlit and shaded vegetation canopies from 1992 to 2020	29
A comprehensive database of active and potentially-active continental faults in Chile at 1:25,000 scale	29
Projecting 1 km-grid population distributions from 2020 to 2100 globally under shared socioeconomic pathways	29
A multimodal sensor dataset for continuous stress detection of nurses in a hospital	29
Question-driven summarization of answers to consumer health questions	29
An improved daily standardized precipitation index dataset for mainland China from 1961 to 2018	29
A curated dataset for data-driven turbulence modelling	29
Maps of cropping patterns in China during 2015–2021	29
Global gridded crop harvested area, production, yield, and monthly physical area data circa 2015	29
Materials informatics platform with three dimensional structures, workflow and thermoelectric applications	29
A real-time survey on the psychological impact of mild lockdown for COVID-19 in the Japanese population	29
SMAP-HydroBlocks, a 30-m satellite-based soil moisture dataset for the conterminous US	28
Peeking into a black box, the fairness and generalizability of a MIMIC-III benchmarking model	28
A building height dataset across China in 2017 estimated by the spatially-informed approach	28
Accelerometer data collected with a minimum set of wearable sensors from subjects with Parkinson’s disease	28
The short-term mortality fluctuation data series, monitoring mortality shocks across time and space	28
The International Bathymetric Chart of the Southern Ocean Version 2	28
A comprehensive spectral assay library to quantify the Escherichia coli proteome by DIA/SWATH-MS	28
A compilation of experimental data on the mechanical properties and microstructural features of Ti-alloys	27
The Cuban Human Brain Mapping Project, a young and middle age population-based EEG, MRI, and cognition dataset	27
A global dataset for crop production under conventional tillage and no tillage systems	27
An Open MRI Dataset For Multiscale Neuroscience	27
The IDEAL household energy dataset, electricity, gas, contextual sensor data and survey data for 255 UK homes	27
UWB-gestures, a public dataset of dynamic hand gestures acquired using impulse radar sensors	27
GLOBathy, the global lakes bathymetry dataset	27
Global data on earthworm abundance, biomass, diversity and corresponding environmental properties	27
Global 1-km present and future hourly anthropogenic heat flux	27
A database framework for rapid screening of structure-function relationships in PFAS chemistry	27
Multicenter dataset of multi-shell diffusion MRI in healthy traveling adults with identical settings	27
GDIS, a global dataset of geocoded disaster locations	27
Dataset on SARS-CoV-2 non-pharmaceutical interventions in Brazilian municipalities	27
Consensus transcriptional regulatory networks of coronavirus-infected human cells	26
Emognition dataset: emotion recognition with self-reports, facial expressions, and physiology using wearables	26
European primary forest database v2.0	26
Fault2SHA Central Apennines database and structuring active fault data for seismic hazard assessment	26
Text-mined dataset of gold nanoparticle synthesis procedures, morphologies, and size entities	26
Annual dynamic dataset of global cropping intensity from 2001 to 2019	26
Database of Italian present-day stress indicators, IPSI 1.4	26
Implementation of FAIR principles in the IPCC: the WGI AR6 Atlas repository	26
A global map of planting years of plantations	26
An improved high-quality genome assembly and annotation of Tibetan hulless barley	26
Quality control and removal of technical variation of NMR metabolic biomarker data in ~120,000 UK Biobank participants	26
GloSEM: High-resolution global estimates of present and future soil displacement in croplands by water erosion	25
An fMRI dataset in response to “The Grand Budapest Hotel”, a socially-rich, naturalistic movie	25