Microbial Genomics

Papers
(The H4-Index of Microbial Genomics is 21. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-04-01 to 2025-04-01.)
ArticleCitations
Independent origins and evolution of the secondary replicons of the class Gammaproteobacteria398
Genomic and pathogenicity analyses to identify the causative agent from multiple serogroups of non-O1, non-O139 Vibrio cholerae in foodborne outbreaks243
How public health authorities can use pathogen genomics in health protection practice: a consensus-building Delphi study conducted in the United Kingdom97
A comparative study of pan-genome methods for microbial organisms: Acinetobacter baumannii pan-genome reveals structural variation in antimicrobial resistance-carrying plasmids55
Metagenomic comparisons reveal a highly diverse and unique viral community in a seasonally fluctuating hypersaline microbial mat47
Novel emm4 lineage associated with an upsurge in invasive group A streptococcal disease in the Netherlands, 202245
Acquisition of Type I methyltransferase via horizontal gene transfer increases the drug resistance of Aeromonas veronii42
Diversity of the type VI secretion systems in the Neisseria spp38
Comparative genomics of a novel Erwinia species associated with the Highland midge (Culicoides impunctatus)33
Detection of plasmid contigs in draft genome assemblies using customized Kraken databases28
Analysis of putative quadruplex-forming sequences in fungal genomes: novel antifungal targets?28
Whole-Genome sequencing in routine Mycobacterium bovis epidemiology – scoping the potential28
Complete, closed and curated genome sequences of Photobacterium damselae subsp. piscicida isolates from Australia indicate mobilome-driven localized evolution and novel pathogenicity determinants28
High-resolution microbiome analysis enabled by linking of 16S rRNA gene sequences with adjacent genomic contexts26
Phylogeography and resistome of pneumococcal meningitis in West Africa before and after vaccine introduction26
wMel Wolbachia genome remains stable after 7 years in Australian Aedes aegypti field populations25
Comparative genomic analysis of obligately piezophilic Moritella yayanosii DB21MT-5 reveals bacterial adaptation to the Challenger Deep, Mariana Trench25
Distribution and genomic characterization of tigecycline-resistant tet(X4)-positive Escherichia coli of swine farm origin24
Mutations in the gdpP gene are a clinically relevant mechanism for β-lactam resistance in meticillin-resistant Staphylococcus aureus lacking mec determinants24
Bilateral symmetry of linear streptomycete chromosomes23
Insights on the SARS-CoV-2 genome variability: the lesson learned in Brazil and its impacts on the future of pandemics22
Complete genome for Actinobacillus pleuropneumoniae serovar 8 reference strain 405: comparative analysis with draft genomes for different laboratory stock cultures indicates little genetic variation21
Genome editing reveals that pSCL4 is required for chromosome linearity in Streptomyces clavuligerus21
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