Biomedical Optics Express

Article	Citations
Recording dynamic facial micro-expressions with a multi-focus camera array	104
Compact and aberration effects-shielded objective intraocular scatter measurement system	61
Polarimetric imaging of peripheral nerves: an intraoperative aid	58
Active remote focus stabilization in oblique plane microscopy	56
SpecstatOR: Speckle statistics-based iOCT Segmentation Network for Ophthalmic Surgery	53
PS-OCT imaging of the anterior segment under different eyeball rotations	52
Method for nanoparticles uptake evaluation based on double labeled fluorescent cells scanned in enhanced darkfield microscopy	51
Intra-tracheal multiplexed sensing of contact pressure and perfusion	50
Multimodal analysis of traction forces and the temperature dynamics of living cells with a diamond-embedded substrate	49
Machine learning-based rapid diagnosis of human borderline ovarian cancer on second-harmonic generation images	48
Convolutional dictionary learning for blind deconvolution of optical coherence tomography images	48
CCS-UNet: a cross-channel spatial attention model for accurate retinal vessel segmentation	47
Heterogeneities of zebrafish vasculature development studied by a high throughput light-sheet flow imaging system	46
Twenty-five years of clinical applications using adaptive optics ophthalmoscopy [Invited]	43
Development of silicone-based phantoms for biomedical optics from 400 to 1550 nm	40
OAH-Net: a deep neural network for efficient and robust hologram reconstruction for off-axis digital holographic microscopy	40
Chromatic dispersion based axial length estimation using retinal spectral domain optical coherence tomography	37
Unpaired intra-operative OCT (iOCT) video super-resolution with contrastive learning: erratum	36
Optical coherence tomography guided automatic robotic craniotomy surgery platform	36
Mueller matrix polarimetry and polar decomposition of articular cartilage imaged in reflectance	35
Automated segmentation of the ciliary muscle in OCT images using fully convolutional networks	34
Collagen organization and structure in FBLN5-/- mice using label-free microscopy: implications for pelvic organ prolapse	33
Deep learning-based classification of the anterior chamber angle in glaucoma gonioscopy	32
Fluence rate directly derived from photon pathlengths: a tool for Monte Carlo simulations in biomedical optics	32
Suppression of motion artifacts in intravascular photoacoustic image sequences	32

Comparison of whole blood and serum samples of breast cancer based on laser-induced breakdown spectroscopy with machine learning	31
Non-invasive quantification of total hemoglobin concentrations by visible-light spectroscopic optical coherence tomography: a validation study on healthy volunteers	30
Molecular and cellular imaging of the eye	30
Automatic and quantitative measurement of alveolar bone level in OCT images using deep learning: erratum	30
Photoacoustic microscopy of vascular adaptation and tissue oxygen metabolism during cutaneous wound healing	30
Intraoperative colon perfusion assessment using multispectral imaging	29
Terahertz dielectric spectroscopy and solid immersion microscopy of ex vivo glioma model 101.8: brain tissue heterogeneity	29
Dynamic Light Scattering in Biomedical Applications: feature issue introduction	28
Low-cost camera-based assessment of venous hemodynamics in the lower limbs: a study on young healthy volunteers	28
Design and characterization of an optical phantom for mesoscopic multimodal fluorescence lifetime imaging and optical coherence elastography	27
Thermal imaging-based core peripheral temperature difference measurement for neonatal monitoring in the NICU	27
Multispectral photoacoustic imaging of breast cancer tissue with histopathology validation	27
Quantitative tumor depth determination using dual wavelength excitation fluorescence	26
Non-invasive laser speckle contrast imaging (LSCI) of extra-embryonic blood vessels in intact avian eggs at early developmental stages	26
Postoperative intraocular lens tilt from preoperative full crystalline lens geometry using machine learning	26
Identifying phenotypes of colorectal malignant tumors using the quasi-bound state in the continuum of a terahertz metasurface biosensor	26
Increasing the spatial bandwidth product in light field microscopy with remote scanning	26
Harnessing the power of optical microscopy for visualization and analysis of histopathological images	26
Analytical optimization of the cutting efficiency for generic cavitation bubbles	26
LS-Net: lightweight segmentation network for dermatological epidermal segmentation in optical coherence tomography imaging	25
Spatiotemporal singular value decomposition for denoising in photoacoustic imaging with a low-energy excitation light source	25
Frequency modulation stimulated Raman scattering scheme for real-time background correction with a single light source	25
Real-time OCT image denoising using a self-fusion neural network	25
Biomedical Optics Express recognizes the best paper prize winners: editorial	24
In vivo measurement of the biomechanical properties of human skin with motion-corrected Brillouin microscopy	24
Visualization of carious lesions with polarized and depolarized light microscopy	24
Depth-resolved extraction of optical attenuation for glaucoma assessment in clinical settings: a pilot study	24
High-fidelity diabetic retina fundus image synthesis from freestyle lesion maps	24
Highly-selective optical filter for NADH fluorescence detection in multiphoton microscopy	24
Absolute prediction of relative changes in contrast sensitivity with aberrations using a single metric of retinal image quality	24
Optofluidic chip with directly printed polymer optical waveguide Mach-Zehnder interferometer sensors for label-free biodetection	24
Blood metal analysis of plasmas from donors with and without SARS-CoV-2 using laser-induced breakdown spectroscopy and logistic regression	23
Laser-induced injury of the skin: validation of a computer model to predict thresholds	23
Weakly supervised semantic segmentation of leukocyte images based on class activation maps	23
Microfluidic immunosensor based on a graphene oxide functionalized double helix microfiber coupler for anti-Müllerian hormone detection	23
Label-free whole-kidney metabolic optical imaging using in vivo insulated cryofixation and cryo-micro-optical sectioning tomography	23
Functionalized optical fiber ball-shaped biosensor for label-free, low-limit detection of IL-8 protein	23
Statistical analysis of corneal OCT speckle: a non-parametric approach	22
Comprehensive assessment of the anterior segment in refraction corrected OCT based on multitask learning	22
Impact of skin tone on photoacoustic oximetry and tools to minimize bias	22
Synthesizing the degree of polarization uniformity from non-polarization-sensitive optical coherence tomography signals using a neural network	22
Wavefront sensor-less adaptive optics using deep reinforcement learning	22
Blind deconvolution of second harmonic microscopy images of the living human eye	22
High-fidelity and rapid cellular-level Mueller matrix imaging for tissue identification with unstained sections	22
Rapid 3D isotropic imaging of whole organ with double-ring light-sheet microscopy and self-learning side-lobe elimination	22
Clot composition characterization using diffuse reflectance spectroscopy in acute ischemic stroke	22
In vivo two-dimensional quantitative imaging of skin and cutaneous microcirculation with perturbative spatial frequency domain imaging (p-SFDI)	22
Large diameter electrically tunable lens for ophthalmic distance accommodation	22
3D stimulated Raman spectral imaging of water dynamics associated with pectin-glycocalyceal entanglement	22
Expansion tomography for large volume tissue imaging with nanoscale resolution	22

Deep learning using a residual deconvolutional network enables real-time high-density single-molecule localization microscopy	21
Characterization of pathological stomach tissue using polarization-sensitive second harmonic generation microscopy	21
Evaluating spatial dependency of the spectral efficiency in trans-palpebral illumination for widefield fundus photography	21
Super-Resolution-Chip: an in-vitro platform that enables super-resolution microscopy of co-cultures and 3D systems	21
Enhanced functionalities of immune cells separated by a microfluidic lattice: assessment based on holotomography	21
PhaseRMiC: phase real-time microscope camera for live cell imaging	21
Noncontact longitudinal shear wave imaging for the evaluation of heterogeneous porcine brain biomechanical properties using optical coherence elastography	20
Automatic threshold selection algorithm to distinguish a tissue chromophore from the background in photoacoustic imaging	20
ESDiff: a joint model for low-quality retinal image enhancement and vessel segmentation using a diffusion model	20
Raman spectromics method for fast and label-free genotype screening	20
Descanned fast light targeting (deFLiT) two-photon optogenetics	20
Microscopic optical coherence tomography (mOCT) at 600 kHz for 4D volumetric imaging and dynamic contrast	20
Refractive index tomography with a physics-based optical neural network	20
Label-free multimodal imaging with simultaneous two-photon and three-photon microscopy and kernel-based nonlinear scaling denoising	20
Handheld interventional ultrasound/photoacoustic puncture needle navigation based on deep learning segmentation	20
Effect of the VR-guided grasping task on the brain functional network	20
Notch RGB-camera based SpO2 estimation: a clinical trial in neonatal intensive care unit	20
Optical tomography in a single camera frame using fringe-encoded deep-learning full-field OCT	19
Automated inter-device 3D OCT image registration using deep learning and retinal layer segmentation	19
Deep learning-assisted 3D laser steering using an optofluidic laser scanner	19
Convolutional sparse coding for compressed sensing photoacoustic CT reconstruction with partially known support	19
Serum-based Raman spectroscopic diagnosis of blast-induced brain injury in a rat model	19
Relevance and utility of the in-vivo and ex-vivo optical properties of the skin reported in the literature: a review [Invited]	19
Technologies for depth scanning in miniature optical imaging systems [Invited]	19
Central and peripheral refraction measured by a novel double-pass instrument	19
Design and characterization of color printed polyurethane films as biomedical phantom layers	19
Modelling red blood cell optical trapping by machine learning improved geometrical optics calculations	19
Real-time closed-loop tissue-specific laser osteotomy using deep-learning-assisted optical coherence tomography	19
Photoacoustic tomography as a method to estimate the optical fluence distribution in turbid media	19
Reduction of spherical and chromatic aberration in axial-scanning optical systems with tunable lenses	19
Plasmonic optical fiber for bacteria manipulation—characterization and visualization of accumulation behavior under plasmo-thermal trapping	19
Comparative analysis of full-field OCT and optical transmission tomography	18
Photoacoustic computed tomography of mechanical HIFU-induced vascular injury	18
Rapid non-destructive volumetric tumor yield assessment in fresh lung core needle biopsies using polarization sensitive optical coherence tomography	18
Simultaneous label-free autofluorescence multi-harmonic microscopy driven by the supercontinuum generated from a bulk nonlinear crystal	18
Rapid azoospermia classification by stimulated Raman scattering and second harmonic generation microscopy	18
Heterodyne Brillouin microscopy for biomechanical imaging	18
Statistics of maximum photon penetration depth in a two-layer diffusive medium	18
Disassembly of microtubules by intense terahertz pulses	18
Evaluating the performance of OCT in assessing static and potential dynamic properties of the retinal ganglion cells and nerve fiber bundles in the living mouse eye	18
MAFE-Net: retinal vessel segmentation based on a multiple attention-guided fusion mechanism and ensemble learning network	18
Liver injury monitoring using dynamic fluorescence molecular tomography based on a time-energy difference strategy	18
All-fiberized 1840-nm femtosecond thulium fiber laser for label-free nonlinear microscopy	18
Digital ocular swept source optical coherence aberrometry	18
Student becomes teacher: training faster deep learning lightweight networks for automated identification of optical coherence tomography B-scans of interest using a student-teacher framework	18
Multifunctional adaptive optics optical coherence tomography allows cellular scale reflectometry, polarimetry, and angiography in the living human eye	18
Multiphoton excitation imaging via an actively mode-locked tunable fiber-cavity SOA laser around 800 nm	17
Gamut mapping based image enhancement algorithm for color deficiencies	17
Aberration measurement and correction on a large field of view in fluorescence microscopy	17
Automatic montaging of adaptive optics SLO retinal images based on graph theory	17
High-precision sensor for glucose solution using active multidimensional feature THz spectroscopy	17
Understanding the relationship between visual-angle and eye-angle for reliable determination of the field-of-view in ultra-wide field fundus photography	17
En-face polarization-sensitive optical coherence tomography to characterize early-stage esophageal cancer and determine tumor margin	17
High-resolution sub-millimetre diameter side-viewing all-optical ultrasound transducer based on a single dual-clad optical fibre	17
Enhanced model iteration algorithm with graph neural network for diffuse optical tomography	17
PSCAT: a lightweight transformer for simultaneous denoising and super-resolution of OCT images	17
Dynamic volumetric imaging and cilia beat mapping in the mouse male reproductive tract with optical coherence tomography	17
Multiplane differential saturated excitation microscopy using varifocal lenses	17
In vivo bioluminescence tomography-guided system for pancreatic cancer radiotherapy research	17
Aberration compensation in Doppler holography of the human eye fundus by subaperture signal correlation	17
Validation of photoacoustic/ultrasound dual imaging in evaluating blood oxygen saturation	17
Wavelet attention network for the segmentation of layer structures on OCT images	17
Virtual simulator for cystoscopy containing motion blur and bladder debris to aid the development of clinical tools	17
Real-time calibrating polarization-sensitive diffuse reflectance handheld probe characterizes clinically relevant anatomical locations of oral tissue in vivo	17
Combined ion beam irradiation platform and 3D fluorescence microscope for cellular cancer research	17
MCOCT: an experimentally and numerically validated, open-source Monte Carlo simulator for optical coherence tomography	17
Self-supervised Self2Self denoising strategy for OCT speckle reduction with a single noisy image	17
Wavelength and frequency optimization in spatial frequency domain imaging for two-layer tissue	17
Quantitative phase image stitching guided by reconstructed intensity images in one-shot double field of view multiplexed digital holographic microscopy	17
Extending field-of-view of retinal imaging by optical coherence tomography using convolutional Lissajous and slow scan patterns	16
Fast and customizable image formation model for optical coherence tomography	16
Multispectral intraoperative imaging for the detection of the hemodynamic response to interictal epileptiform discharges	16
Super resolution reconstruction of fluorescence microscopy images by a convolutional network with physical priors	16
SODL-IR-FISTA: sparse online dictionary learning with iterative reduction FISTA for cone-beam X-ray luminescence computed tomography	16
Co-registered speckle contrast optical tomography and frequency domain-diffuse optical tomography for imaging of the fifth metatarsal	16
Comprehensive automatic processing and analysis of adaptive optics flood illumination retinal images on healthy subjects	16
Dynamic tracking of onion-like carbon nanoparticles in cancer cells using limited-angle holographic tomography with self-supervised learning	16
Multiphoton scaling of femtosecond laser-induced refractive index change (LIRIC) in hydrogels and rabbit cornea	16
In vivo PS-OCT needle probe scan of human skeletal muscle	16
Hybrid confocal Raman endomicroscopy for morpho-chemical tissue characterization	16

Adaptive optics visual simulators: a review of recent optical designs and applications [Invited]	16
Boosting few-shot confocal endomicroscopy image recognition with feature-level MixSiam	16
Prediction of the postoperative prognosis in patients with non-muscle-invasive bladder cancer based on preoperative serum surface-enhanced Raman spectroscopy	16
Near-infrared, wavelength, and illumination scanning holographic tomography	16
Label free optical transmission tomography for biosystems: intracellular structures and dynamics	16
Three-dimensional mechanical characterization of murine skeletal muscle using quantitative micro-elastography	16
Sidelobe suppressed Bessel beams for one-photon light-sheet microscopy	16
Mechanical stability of polarization signatures in biological tissue characterization	16
Two photon imaging probe with highly efficient autofluorescence collection at high scattering and deep imaging conditions	16
Spatio-temporal classification for polyp diagnosis	16
Automatic geographic atrophy segmentation using optical attenuation in OCT scans with deep learning	16
LuckyProfiler: an ImageJ plug-in capable of quantifying FWHM resolution easily and effectively for super-resolution images	16
Characterizing cone spectral classification by optoretinography	16
Using deep learning for the automated identification of cone and rod photoreceptors from adaptive optics imaging of the human retina	16
Mechanically sheared axially swept light-sheet microscopy	16
Absolute Grüneisen parameter measurement in deep tissue based on X-ray-induced acoustic computed tomography	15
Polarization-based probabilistic discriminative model for quantitative characterization of cancer cells	15
Switchable preamplifier for dual modal photoacoustic and ultrasound imaging	15
Effectiveness of collagen cross-linking induced by two-photon absorption properties of a femtosecond laser in ex vivo human corneal stroma	15
In vivo tracking of individual stem cells labeled with nanowire lasers using multimodality imaging	15
Complexity of crystalline lens wobbling investigated by means of combined mechanical and optical simulations	15
Quasi-distributed fiber optic sensor-based control system for interstitial laser ablation of tissue: theoretical and experimental investigations	15
Transient absorption spectroscopy and imaging of redox in muscle mitochondria	15
Aging of deep venous thrombosis in-vivo using polarization sensitive optical coherence tomography	15
Measurement of third order coherence by in situ autocorrelation for determining three-photon cross-sections	15
High-sensitivity THz-ATR imaging of cerebral ischemia in a rat model	15
In vivo three-photon fluorescence imaging of mouse brain vasculature labeled by Evans blue excited at the NIR-III window	15
Tailored approach to study Legionella infection using a lattice light sheet microscope (LLSM)	15
Fluorescence lifetime tracking and imaging of single moving particles assisted by a low-photon-count analysis algorithm	15
Longitudinal tracking of perfluorooctanoic acid exposure on mammary epithelial cell spheroids by dynamic optical coherence tomography	15
Instrument for fast whole-field peripheral refraction in the human eye	15
AI-based 3D analysis of retinal vasculature associated with retinal diseases using OCT angiography	15
Reflectance evaluation of eye fundus structures with a visible and near-infrared multispectral camera	15
Intraocular scatter compensation with spatial light amplitude modulation for improved vision in simulated cataractous eyes	15
All-fiber SPR microfluidic chip for GDF11 detection	15
GAN-based quantitative oblique back-illumination microscopy enables computationally efficient epi-mode refractive index tomography	15
Membranous nephropathy classification using microscopic hyperspectral imaging and tensor patch-based discriminative linear regression	15
Modified Beer-Lambert algorithm to measure pulsatile blood flow, critical closing pressure, and intracranial hypertension	15
Cross-modal attention network for retinal disease classification based on multi-modal images	15
Interferometric thermometry of ocular tissues for retinal laser therapy	15
Optical directional differential operation enabled visual chirality detection	14
Photodynamic therapy reduces metastasis of breast cancer by minimizing circulating tumor cells	14
Automated endocardial cushion segmentation and cellularization quantification in developing hearts using optical coherence tomography	14
Characteristics of Henle’s fiber layer in healthy and glaucoma eyes assessed by polarization-sensitive optical coherence tomography	14
Smartphone-based optical palpation: towards elastography of skin for telehealth applications	14
All fiber-based illumination system for multi-exposure speckle imaging	14
Automatic measurement of anterior chamber angle parameters in AS-OCT images using deep learning	14
Effect of fixational eye movements in corneal topography measurements with optical coherence tomography	14
Optical memory effect of excised cataractous human crystalline lenses	14
Investigation of refractive index dynamics during in vitro embryo development using off-axis digital holographic microscopy	14
Lymphography method based on time-autocorrelated optical coherence tomography	14
Active image optimization for lattice light sheet microscopy in thick samples	14
Quantification of intermittent retinal capillary perfusion in sickle cell disease	14
Ultra-wide-angle peripheral refraction using a laser-scanning instrument	14
Sensitivity of visible range multi-wavelength algorithms for retinal tissue oximetry to acquisition parameters	14
Detection speed optimization of the OI-RD microscope for ultra-high throughput screening	14
Acoustomotive diffuse correlation spectroscopy for sensing mechanical stiffness in tissue-mimicking phantoms	14
Diffractive hyperchromatic objective for chromatic confocal microscopy	14
Non-uniform image reconstruction for fast photoacoustic microscopy of histology imaging	14
Multi-color flow cytometer with PIC-based structured illumination	14
Analytical ray transfer matrix for the crystalline lens	14
Sidelobe suppression in structured light sheet fluorescence microscopy by the superposition of two light sheets	14
Photoacoustic imaging to monitor outcomes during hyperbaric oxygen therapy: validation in a small cohort and case study in a bilateral chronic ischemic wound	14
Continuous spectral zooming for in vivo live 4D-OCT with MHz A-scan rates and long coherence	13
Integrating clinical access limitations into iPDT treatment planning with PDT-SPACE	13
OCT based four-dimensional cardiac imaging of a living chick embryo using an impedance signal as a gating for post-acquisition synchronization	13
Multi-focus averaging for multiple scattering suppression in optical coherence tomography	13
Approximate image synthesis in optical coherence tomography	13
Histogram clustering for rapid time-domain fluorescence lifetime image analysis	13
Three-dimensional virtual histology of the cerebral cortex based on phase-contrast X-ray tomography	13
Imaging the intracellular refractive index distribution (IRID) for dynamic label-free living colon cancer cells via circularly depolarization decay model (CDDM)	13
Effect of NIR light on the permeability of the blood-brain barriers in in vitro models	13
Theoretical and experimental determination of the confocal function of OCT systems for accurate calculation of sample optical properties	13
Dynamic speckle illumination wide-field fluorescence microscopy with actively optical manipulation of rotational angles	13
Spectrally encoded flow cytometry using few-mode fiber collection	13
Deep learning provides high accuracy in automated chondrocyte viability assessment in articular cartilage using nonlinear optical microscopy	13
Study on an artificial phenomenon observed in terahertz biological imaging	13
LKG-Net: lightweight keratoconus grading network based on corneal topography	13
Development and evaluation of a wearable peripheral vascular compensation sensor in a swine model of hemorrhage	13
Ultracompact fluorescence smartphone attachment using built-in optics for protoporphyrin-IX quantification in skin	13
Determination of best Raman spectroscopy spatial offsets for transcutaneous bone quality assessments in human hands	13
Brain tumor grading diagnosis using transfer learning based on optical coherence tomography	13
Imaging deeper than the transport mean free path with multiphoton microscopy	13
Self-attention CNN for retinal layer segmentation in OCT	13
Temporal phase evolution OCT for measurement of tissue deformation in the human retina in-vivo	13
Three-dimensional cerebral vasculature topological parameter extraction of transgenic zebrafish embryos with a filling-enhancement deep learning network	13
Measurement of red blood cell deformability during morphological changes using rotating-glass-plate-based scanning optical tweezers	13
Silicon-photonics focused ultrasound detector for minimally invasive optoacoustic imaging	13
Assessment of retinal vein pulsation through video-ophthalmoscopy and simultaneous biosignals acquisition	13
Semi-supervised 3D retinal fluid segmentation via correlation mutual learning with global reasoning attention	13
Noninvasive and early diagnosis of acquired brain injury using fluorescence imaging in the NIR-II window	13
Axial motion estimation and correction for simultaneous multi-plane two-photon calcium imaging	13
Tissue mimicking materials and finger phantom design for pulse oximetry	13
Adaptive brightness fusion method for intraoperative near-infrared fluorescence and visible images	13
Lipoarabinomannan-based tuberculosis diagnosis using a fiber cavity ring down biosensor	13