Applications in Plant Sciences

Papers
(The TQCC of Applications in Plant Sciences is 6. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-05-01 to 2026-05-01.)
ArticleCitations
142
55
A unified framework to investigate and interpret hybrid and allopolyploid biodiversity across biological scales43
Astragalean819: An Astragalean clade‐specific bait set to resolve phylogenetic relationships in Astragalus35
Use of electrolyte leakage to assess floral damage after freezing34
Making sense of complexity: Advances in bioinformatics for plant biology33
Optimizing efficient PCR‐amplifiable DNA extraction from herbarium specimens31
Correction to Welcome to the big leaves: Best practices for improving genome annotation in non‐model plant genomes28
mvh: An R tool to assemble and organize virtual herbaria from openly available specimen images28
A practical and easy‐to‐scale protocol for removing chlorophylls from leaf extracts25
The challenges of growing orchids from seeds for conservation: An assessment of asymbiotic techniques25
Conservation Action Tracker: A tool to identify and monitor conservation actions for tree species24
Charting the course for new discoveries in polyploid lineages24
Building capacity in the conservation of exceptional plant species18
Correction to “A comparison of freezer‐stored DNA and herbarium tissue samples for chloroplast assembly and genome skimming”18
Supporting long‐term sustainability of ex situ collections using a pedigree‐based population management approach17
16
Expression‐based machine learning models for predicting plant tissue identity15
Acknowledgment of Reviewers15
Experimental methods for wind tunnel studies of seed dispersal by wind14
Data‐centric species distribution modeling: Impacts of modeler decisions in a case study of invasive European frog‐bit13
Enhancing plant morphological trait identification in herbarium collections through deep learning–based segmentation12
Applying a modified metabarcoding approach for the sequencing of macrofungal specimens from fungarium collections11
SkelPy: A graphic user interface–based approach for skeletonizing fungal networks11
Protocol to control the invasive alga Avrainvillea lacerata in a shallow Hawaiian reef flat11
An automated pipeline for supervised classification of petal color from citizen science photographs11
A machine learning algorithm for the automatic classification of Phytophthora infestans genotypes into clonal lineages10
Semi‐automated assessment for NatureServe subnational conservation status ranks for state floras10
10
Fully automatic extraction of morphological traits from the web: Utopia or reality?10
9
DNA release from plant tissue using focused ultrasound extraction (FUSE)9
Advances in analyzing and engineering plant metabolic diversity9
Just add water: A simple floral bud injection method for stable Agrobacterium ‐mediated transformation in two ecotypes of Mimulus 9
Issue Information9
Modified CTAB protocols for high‐molecular‐weight DNA extractions from ferns9
Review of the cellulose acetate peel method and the physical and digital curation of coal balls8
8
A novel combination of in vitro propagation and hydroponic culture for hybrid cacao (Theobroma cacao) plants8
8
Using marsh organs to test seed recruitment in tidal freshwater marshes8
Ethanol preservation and pretreatments facilitate quality DNA extractions in recalcitrant plant species8
A low‐cost protocol for the optical method of vulnerability curves to calculate P508
Are they two seeds in a pod? Comparing seed rain recovery in grasslands using artificial grass carpets versus sticky traps8
Infrared spectroscopy for ploidy estimation: An example in two species of Veronica using fresh and herbarium specimens7
7
Issue Information7
Multiple Leaf Sample Extraction System (MuLES): A tool to improve automated morphometric leaf studies7
Animal‐mediated seed dispersal: A review of study methods7
Analysis of plant metabolomics data using identification‐free approaches7
Hijacking a rapid and scalable metagenomic method reveals subgenome dynamics and evolution in polyploid plants7
Chromosome‐scale reference genome of Pectocarya recurvata , the species with the smallest reported genome size in Boraginaceae6
DNA assays for genetic discrimination of three Phragmites australis subspecies in the United States6
A simple and affordable protocol to assess censer seed dispersal: First confirmation of the mechanism in the genus Solanum6
An open‐source LED lamp for use with the LI‐6800 photosynthesis system6
expowo: An R package for mining global plant diversity and distribution data6
A new spin on chemotaxonomy: Using non‐proteogenic amino acids as a test case6
PlantSAM: An object detection‐driven segmentation pipeline for herbarium specimens6
Using large language models to extract plant functional traits from unstructured text6
InDelGT: An integrated pipeline for extracting indel genotypes for genetic mapping in a hybrid population using next‐generation sequencing data6
6
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