Stem Cell Reports

Papers
(The TQCC of Stem Cell Reports is 13. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-07-01 to 2026-07-01.)
ArticleCitations
MSCohi-O lenses for long-term retention of mesenchymal stem cells on ocular surface as a therapeutic approach for chronic ocular graft-versus-host disease113
Stem cells in your YouTube feed: The complex landscape and unexpected mediators of online information110
USP7 inactivation suppresses APC-mutant intestinal hyperproliferation and tumor development108
Familial Alzheimer’s disease-associated PSEN1 mutations affect neurodevelopment through increased Notch signaling93
Dissecting the impact of differentiation stage, replicative history, and cell type composition on epigenetic clocks67
Human iPSC-Derived Hippocampal Spheroids: An Innovative Tool for Stratifying Alzheimer Disease Patient-Specific Cellular Phenotypes and Developing Therapies63
Ribosomal proteins regulate 2-cell-stage transcriptome in mouse embryonic stem cells59
Pen-2 regulates glial homeostasis by coordinating self-renewal and transdifferentiation programs in oligodendrocyte precursor cells55
Effect of Notch1 signaling on muscle engraftment and maturation from pluripotent stem cells54
Diversity of cortical progenitors directs neuronal layer formation and regional glial patterning54
Hsp70-Bim interaction mediated mitophagy as a potential therapeutic target for CML stem cells51
Therapeutic reactivation of hippocampal progenitors reverse cognition decline in mice with progressive brain demyelination50
A versatile in vivo platform for reversible control of transgene expression in adult tissues50
Single-cell characterization of neovascularization using hiPSC-derived endothelial cells in a 3D microenvironment47
Discovery of kidney disease targets using multimodal human podocyte injury models46
Connie Eaves (1944–2024)45
Anesthetic-induced neurodevelopmental changes with region-specific responses to propofol in forebrain organoids45
Bone morphogenetic protein 4 induces hematopoietic stem cell development from murine hemogenic endothelial cells in culture45
In and out: Benchmarking in vitro, in vivo, ex vivo, and xenografting approaches for an integrative brain disease modeling pipeline44
Stabilization of cell-cell adhesions prevents symmetry breaking and locks in pluripotency in 3D gastruloids43
A novel paradigm for single-cell annotation in stem cell research41
Differentiation success of reprogrammed cells is heterogeneous in vivo and modulated by somatic cell identity memory41
Plasticity of ocular surface epithelia: Using a murine model of limbal stem cell deficiency to delineate metaplasia and transdifferentiation40
Discovery of NANOG enhancers and their essential roles in self-renewal and differentiation in human embryonic stem cells40
Complex haploinsufficiency in pluripotent cells yields somatic cells with DNA methylation abnormalities and pluripotency induction defects40
Human spinal GABA neurons survive and mature in the injured nonhuman primate spinal cord39
Pluripotent stem cell lines available for use in clinical applications: A comprehensive overview39
H1FOO-DD promotes efficiency and uniformity in reprogramming to naive pluripotency39
Gains of 20q11.21 in human pluripotent stem cells: Insights from cancer research39
DOT1L regulates lung developmental epithelial cell fate and adult alveolar stem cell differentiation after acute injury39
Single-cell approaches define two groups of mammalian oligodendrocyte precursor cells and their evolution over developmental time37
Human iPSC-derived neural progenitor cells rescue motor function and brain pathology in symptomatic Canavan disease mice37
Single-cell transcriptomics reveals correct developmental dynamics and high-quality midbrain cell types by improved hESC differentiation36
Closing the gap? China’s new regulation on biomedical technologies36
Microbiota from young mice restore the function of aged ISCs36
Suppression of ATM kinase signaling accelerates cellular senescence34
Selective Cav1.3 inhibition promotes survival of transplanted dopaminergic neurons via the CaMKII-p65-p53 pathway34
Functionally redundant roles of ID family proteins in spermatogonial stem cells34
CD157+ vascular endothelial stem cells represent a conserved subpopulation with an angiogenic gene expression profile34
Benchmarking and optimizing Perturb-seq in differentiating human pluripotent stem cells33
Medium acidosis drives cardiac differentiation during mesendoderm cell fate specification from human pluripotent stem cells33
Searching for information about stem cells online in an age of artificial intelligence: How should the stem cell community respond?33
Messenger RNA delivery into Sertoli cells restores fertility to congenitally infertile male mice33
Ependymal and neural stem cells are close relatives33
What does “appropriate scientific justification” mean for the review of human pluripotent stem cell, embryo, and related research?32
Glutamine boosts intestinal stem cell-mediated small intestinal epithelial development during early weaning: Involvement of WNT signaling31
Neutrophils as regulators of macrophage-induced inflammation in a setting of allogeneic bone marrow transplantation31
Reduced Self-Diploidization and Improved Survival of Semi-cloned Mice Produced from Androgenetic Haploid Embryonic Stem Cells through Overexpression of Dnmt3b31
Aged human serum induces vascular changes in an isogenic co-culture venule model30
Generation of highly pure pluripotent stem cell-derived myogenic progenitor cells and myotubes30
A humanized engineered heart tissue platform for cardiotoxicity assessment30
Depletion of WFS1 compromises mitochondrial function in hiPSC-derived neuronal models of Wolfram syndrome30
MEF2C/p300-mediated epigenetic remodeling promotes the maturation of induced cardiomyocytes29
Extracellular-vesicle-mediated transfer of let-7b/7c promotes the proliferation of transition-state spermatogonia in neonatal mouse testis29
Human fetal tissue is critical for biomedical research29
The role of m6A RNA methylation in the maintenance of X chromosome inactivation and X-to-autosome dosage compensation in early embryonic lineages29
UHRF1 interacts with snRNAs and regulates alternative splicing in mouse spermatogonial stem cells29
Gene reactivation upon erosion of X chromosome inactivation in female hiPSCs is predictable yet variable and persists through differentiation28
Lessons learnt, and still to learn, in first in human stem cell trials28
BRD9-containing non-canonical BAF complex maintains somatic cell transcriptome and acts as a barrier to human reprogramming28
Public perceptions and expectations: Disentangling the hope and hype of organoid research28
Low fucosylation defines the glycocalyx of progenitor cells and melanocytes in the human limbal stem cell niche27
Mechanical force-promoted osteoclastic differentiation via periodontal ligament stem cell exosomal protein ANXA327
Upregulation of β-catenin due to loss of miR-139 contributes to motor neuron death in amyotrophic lateral sclerosis27
Atypical cell cycle regulation over neural stem cell expansion27
DeePhys: A machine learning–assisted platform for electrophysiological phenotyping of human neuronal networks26
A single cell-based computational platform to identify chemical compounds targeting desired sets of transcription factors for cellular conversion26
Non-canonical roles of CFH in retinal pigment epithelial cells revealed by dysfunctional rare CFH variants26
Parallel use of human stem cell lung and heart models provide insights for SARS-CoV-2 treatment26
Inhibition of N-myristoyltransferase in pluripotent stem cells promotes the naive state in mice and elicits trophectoderm and primitive endoderm markers in humans26
What we thought we knew about TNF—And what we now must re-learn26
CD49b identifies functionally and epigenetically distinct subsets of lineage-biased hematopoietic stem cells26
Leveraging CRISPR activation for rapid assessment of gene editing products in human pluripotent stem cells26
Granulin loss of function in human mature brain organoids implicates astrocytes in TDP-43 pathology25
Metabolic remodeling in hiPSC-derived myofibers carrying the m.3243A>G mutation25
Multiome-based identification of molecular markers for prospective identification of platelet-biased HSCs25
Cloud-connected pluripotent stem cell platform enhances scientific identity in underrepresented students24
Transplantation of human pluripotent stem cell-derived retinal sheet in a primate model of macular hole23
Fractalkine enhances oligodendrocyte regeneration and remyelination in a demyelination mouse model23
New legal category of ‘advanced regenerative medicine treatment’ in Korea’s amended regenerative medicine law: comparative lessons from Japan23
Modeling in vivo induction of gastric insulin-secreting cells using transplanted human stomach organoids23
Astrocytes modulate neurodegenerative phenotypes associated with glaucoma in OPTN(E50K) human stem cell-derived retinal ganglion cells23
Critical considerations for public engagement in stem cell-related research23
Ebola virus infection induces a delayed type I IFN response in bystander cells and the shutdown of key liver genes in human iPSC-derived hepatocytes23
Interspecies chimerism with human embryonic stem cells generates functional human dopamine neurons at low efficiency23
Patient-specific and gene-corrected induced pluripotent stem cell-derived endothelial cells elucidate single-cell phenotype of pulmonary veno-occlusive disease23
Modeling sex differences in humans using isogenic induced pluripotent stem cells23
Mowat-Wilson syndrome factor ZEB2 controls early formation of human neural crest through BMP signaling modulation23
Prosaposin maintains adult neural stem cells in a state associated with deep quiescence22
Generation of canine induced pluripotent stem cells under feeder-free conditions using Sendai virus vector encoding six canine reprogramming factors22
Toward standardized iPSC testing: Insights from a multi-year international Quality Assessment Round22
Titin-truncating variants in hiPSC cardiomyocytes induce pathogenic proteinopathy and sarcomere defects with preserved core contractile machinery22
Involvement of LIN28A in Wnt-dependent regulation of hippocampal neurogenesis in the aging brain22
Aggregation of cryopreserved mid-hindgut endoderm for more reliable and reproducible hPSC-derived small intestinal organoid generation22
AAV-mediated gene augmentation therapy of CRB1 patient-derived retinal organoids restores the histological and transcriptional retinal phenotype21
Histone methyltransferase Setd8 preserves chromatin accessibility to safeguard retinal progenitor cell identity during development21
Characterizing hypoxia-orchestrated post-stroke changes in oligodendrocyte precursor cells for optimized cell therapy21
The trophectoderm acts as a niche for the inner cell mass through C/EBPα-regulated IL-6 signaling21
Taking the leap toward human-specific nonanimal methodologies: The need for harmonizing global policies for microphysiological systems21
Elimination of tumorigenic pluripotent stem cells from their differentiated cell therapy products: An important step toward ensuring safe cell therapy21
Small-molecule inhibitor cocktail promotes the proliferation of pre-existing liver progenitor cells20
Reconstituted ovaries self-assemble without an ovarian surface epithelium20
A year of engagement and growth: ISSCR’s year-end message from the president 2022–202320
Fibroblast fate determination during cardiac reprogramming by remodeling of actin filaments20
Micro-patterned culture of iPSC-derived alveolar and airway cells distinguishes SARS-CoV-2 variants20
Lineage Tracing Reveals the Bipotency of SOX9+ Hepatocytes during Liver Regeneration20
The Wnt-dependent master regulator NKX1-2 controls mouse pre-implantation development20
Toti: An integrated multi-omics database to decipher the epigenetic regulation of gene expression in totipotent stem cells20
Exit from naive pluripotency proceeds with variable latency but without asymmetric division to generate population heterogeneity20
Induction of astrocyte reactivity promotes neurodegeneration in human pluripotent stem cell models20
Businesses marketing purported stem cell treatments and exosome therapies for COVID-19: An analysis of direct-to-consumer online advertising claims19
Aberrant nucleosome organization in mouse SCNT embryos revealed by ULI-MNase-seq19
Identification of glioblastoma stem cell-associated lncRNAs using single-cell RNA sequencing datasets19
Perinuclear mitochondrial clustering for mesenchymal-to-epithelial transition in pluripotency induction19
RBFOX2-dependent alternative splicing of Numb regulates Notch signaling during muscle stem cell activation19
The novel tRF-23 promotes osteogenic differentiation of hBMSCs and protects against bone loss in ovariectomized mice19
Deep-supercooling preservation of stem cell spheroids for chondral defect repairment19
Scalable generation of sensory neurons from human pluripotent stem cells19
Human primed and naïve PSCs are both able to differentiate into trophoblast stem cells19
Embryonic stem cell ERK, AKT, plus STAT3 response dynamics combinatorics are heterogeneous but NANOG state independent19
MIXL1 activation in endoderm differentiation of human induced pluripotent stem cells19
Ribosome biogenesis controls cranial suture MSC fate via the complement pathway in mouse and human iPSC models19
The global downregulation of protein synthesis observed during hepatogenic maturation is associated with a decrease in TOP mRNA translation18
Purification of human iPSC-derived cells at large scale using microRNA switch and magnetic-activated cell sorting18
Cell-autonomous and non-cell-autonomous roles of NKCC1 in regulating neural stem cell quiescence in the hippocampal dentate gyrus18
Human CRX regulates photoreceptor cells development via bidirectional transcriptional control in retinal organoids18
Derivation and analysis of human somatic sensory neuron subtypes facilitated through fluorescent hPSC reporters18
Dual inhibition of MAPK and PI3K/AKT pathways enhances maturation of human iPSC-derived cardiomyocytes18
Ins and outs of HSCs and VEGF-induced vascular remodeling: Toward improved HSC mobilization and engraftment18
A conserved function of EZH2-PRC2 in repression of primitive endoderm fate in mouse and human pluripotent cells18
Prolonged generation of multi-lineage blood cells in wild-type animals from pluripotent stem cells17
Human iPSC-derived neural progenitor cells secreting GDNF provide protection in rodent models of ALS and retinal degeneration17
Satellite glial contact enhances differentiation and maturation of human iPSC-derived sensory neurons17
Engineering human neuronal diversity: Morphogens and stem cell technologies for neurodevelopmental biology17
Generation, genomic characterization, and differentiation of triploid human embryonic stem cells17
Zika virus induces FOXG1 nuclear displacement and downregulation in human neural progenitors17
Long noncoding RNA Lnc530 localizes on R-loops and regulates R-loop formation and genomic stability in mouse embryonic stem cells17
MAC-1 marks a quiescent and functionally superior HSC subset during regeneration17
Diversity-in-a-dish: A practical framework for hiPSC model development17
Astrocytes originated from neural stem cells drive the regenerative remodeling of pathologic CSPGs in spinal cord injury17
The KAP1 chromatin regulator and Paupar long non-coding RNA control subventricular zone neural stem cell maintenance and neurogenesis17
Human microglial cells as a therapeutic target in a neurodevelopmental disease model17
Mitochondrial toxins cause widespread downregulation of pathways in X-linked dystonia-parkinsonism patient-derived neurons16
Graft-derived horizontal cells contribute to host-graft synapses in degenerated retinas after retinal organoid transplantation16
Modeling glioma intratumoral heterogeneity with primary human neural stem and progenitor cells16
Chitinase-like protein 3: A novel niche factor for mouse neural stem cells16
Retinoic acid signaling guides the efficiency of inner ear organoid-genesis and governs sensory-nonsensory fate specification16
ER stress and lipid imbalance drive diabetic embryonic cardiomyopathy in an organoid model of human heart development16
Adult hippocampal neurogenesis: New avenues for treatment of brain disorders16
Human organoids: Fit for drug discovery?16
Derivation of transplantable human thyroid follicular epithelial cells from induced pluripotent stem cells16
Patient-derived parathyroid organoids as a tracer and drug-screening application model16
Generating high-quality porcine iPSCs with the new medium cocktail LACID16
Spatially resolved transcriptomics identifies intercellular signaling post-ischemic stroke that controls neural stem cell proliferation16
Electron transport chain complex I and mitochondrial fusion regulate ROS for differentiation in Drosophila neural stem cells16
An efficient, non-viral arrayed CRISPR screening platform for iPSC-derived myeloid and microglia models16
Small-molecule screen reveals pathways that regulate C4 secretion in stem cell-derived astrocytes16
APOE4 impacts cortical neurodevelopment and alters network formation in human brain organoids15
A Chemically Defined Feeder-free System for the Establishment and Maintenance of the Human Naive Pluripotent State15
Development of a high-efficiency induction system for embryonic oral epithelium from human pluripotent stem cells15
Neuroblast migration along cellular substrates in the developing porcine brain15
Spatial transcriptomics reveals molecular cues underlying the site specificity of the adult mouse oral mucosa and its stem cell niches15
Neuroinflammation and EIF2 Signaling Persist despite Antiretroviral Treatment in an hiPSC Tri-culture Model of HIV Infection15
GSK3α negatively regulates GSK3β by decreasing its protein levels and enzymatic activity in mouse embryonic stem cells15
A defined roadmap of radial glia and astrocyte differentiation from human pluripotent stem cells15
Accelerated mitochondrial dynamics promote spermatogonial differentiation15
Interleukin-1β induces trained innate immunity in human hematopoietic progenitor cells in vitro15
Self-assembling 3D vessel-on-chip model with hiPSC-derived astrocytes15
ERRγ agonist under mechanical stretching manifests hypertrophic cardiomyopathy phenotypes of engineered cardiac tissue through maturation15
Oligodendrocytes in human induced pluripotent stem cell-derived cortical grafts remyelinate adult rat and human cortical neurons15
SnapShot: Reporting practices for publishing results with human PSCs and tissue stem cells14
Atg5 deficiency alters myofibroblast accumulation and alveolar regeneration in lung fibrosis14
Generation of a TPH2-EGFP reporter cell line for purification and monitoring of human serotonin neurons in vitro and in vivo14
A critical role of retinoic acid concentration for the induction of a fully human-like atrial action potential phenotype in hiPSC-CM14
Seamless and non-destructive monitoring of extracellular microRNAs during cardiac differentiation from human pluripotent stem cells14
Molecular signature of human endometrial stem/progenitor cells at the single-cell level14
METTL3 uncouples chromatin accessibility from transcription during retinal development14
Genetic variation modulates susceptibility to aberrant DNA hypomethylation and imprint deregulation in naive pluripotent stem cells14
SARS-CoV-2 infection of airway organoids reveals conserved use of Tetraspanin-8 by Ancestral, Delta, and Omicron variants14
Screening of factors inducing alveolar type 1 epithelial cells using human pluripotent stem cells14
Human iPSC-derived photoreceptor transplantation in the cone dominant 13-lined ground squirrel14
mTORC2-mediated cell-cell interactions promote BMP4-induced WNT activation and mesoderm differentiation13
SALL3 mediates the loss of neuroectodermal differentiation potential in human embryonic stem cells with chromosome 18q loss13
Telmisartan is neuroprotective in a hiPSC-derived spinal microtissue model for C9orf72 ALS via inhibition of neuroinflammation13
Cellular immunotherapy for COVID-19-induced acute respiratory distress syndrome: Results of the CIRCA-19 phase 1 safety and phase 2 randomized controlled trials13
Advances in intravital imaging of adult neurogenesis in mice13
Cell size regulates human endoderm specification through actomyosin-dependent AMOT-YAP signaling13
Transcription factor co-expression mediates lineage priming for embryonic and extra-embryonic differentiation13
Human macula formation involves two waves of retinoic acid suppression via CYP26A1 that modulate cell cycle exit and cone subtype specification13
Unraveling the impact of ZZZ3 on the mTOR/ribosome pathway in human embryonic stem cells homeostasis13
Proteomics-based receptor-ligand matching enhances differentiation maturity of human-stem-cell-derived neurons13
PI3Kβ-regulated β-catenin mediates EZH2 removal from promoters controlling primed human ESC stemness and primitive streak gene expression13
Activation of canonical Wnt signaling is required for efficient direct reprogramming into human hepatic progenitor cells13
The urgent need for clear and concise regulations on exosome-based interventions13
AT7867 promotes pancreatic progenitor differentiation of human iPSCs13
Targeting CCDC90B restores intestinal stem cell function under hyperuricemic stress13
Safe CNV removal is crucial for successful hESC-RPE transplantation in wet age-related macular degeneration13
CD37 regulates the self-renewal of leukemic stem cells via integrin-mediated signaling in acute myeloid leukemia13
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