Crop Journal

Article	Citations
Detection of new candidate genes controlling seed weight by integrating gene coexpression analysis and QTL mapping in Brassica napus L.	259
MePHD1.2 affects the synthesis of cyanogenic glycosides by regulating transcription of MeCYP79D2 in cassava	128
Modulation of rice grain shape and appearance by the GS10-encoded long coiled-coil protein	116
The Magnaporthe oryzae effector Avr-PikD suppresses rice immunity by inhibiting an LSD1-like transcriptional activator	90
Single-cell nuclear transcriptomics reveal root tip adaptations to nitrogen scarcity in wheat	81
GABA transporter OsGAT3 is required for growth and yield in rice under salt and drought stress	79
Quantifying the effects of stripe rust disease on wheat canopy spectrum based on eliminating non-physiological stresses	73
The soybean GmPUB21-interacting protein GmDi19-5 responds to drought and salinity stresses via an ABA-dependent pathway	69
MIR1868 negatively regulates rice cold tolerance at both the seedling and booting stages	67
QTL mapping and transcriptome analysis identify candidate genes influencing water–nitrogen interaction in maize	67
Constructing the maize inflorescence regulatory network by using efficient tsCUT&Tag assay	65
A polygalacturonase gene OsPG1 modulates water homeostasis in rice	63
Sustainable transition for cereal-based agri-food systems in China: Prospective advantages of whole-grain adoption	62
Biomolecular condensates: Emerging regulatory mechanisms for crop improvement	60
Integrated multi-omics analysis identifies OsMYB48 as a transcriptional repressor of coleoptile elongation in anaerobic rice germination	58
Haploids can be induced in knockout mutants of OsPLA1, but not OsDMP3 or OsDMP6, in rice	54
Artificial intelligence redefines agricultural genetics by unlocking the enigma of genomic complexity	54
The transcription factor GmBIM1 negatively regulates plant height in soybean (Glycine max L.)	49
Identification of a major QTL and its candidate genes controlling stem strength in soybean via QTL mapping and GWAS	49
Unraveling the regulatory network of flower coloration in soybean: Insights into roles of GmMYBA3 and GmMYBR1	48
Mutations in the WUSCHEL-related homeobox1 gene cause an increased leaflet number in soybean	47
The continuous wavelet projections algorithm: A practical spectral-feature-mining approach for crop detection	46
Beyond dwarfism: Green Revolution gene Rht-D1b orchestrates tiller angle and canopy architecture in wheat	46
GmNLP7a inhibits soybean nodulation by interacting with GmNIN1a	45
Development of mutants with varying flowering times by targeted editing of multiple SVP gene copies in Brassica napus L.	44

Decoding the inconsistency of six cropland maps in China	44
The rice OsCBL3-OsCIPK31 module regulates root development via abscisic acid and auxin signaling pathways	44
Estimation of spectral responses and chlorophyll based on growth stage effects explored by machine learning methods	43
Field estimation of maize plant height at jointing stage using an RGB-D camera	42
Regulation of tiller angle by gravity-sensing genes in rice	42
Single-cell transcriptome sequencing reveals the mechanism regulating rice plumule development	42
SsdchA is a novel secretory cellobiohydrolase driving pathogenicity in Sclerotinia sclerotiorum	41
TaIAA10-6D orchestrates processing quality and grain yield by modulating glutenin/gliadin ratio and plant morphogenesis in wheat	41
Optimizing maize growth and N dynamics in Northeast China by combining dairy cattle slurry and synthetic fertilizer	41
Isolating QTL controlling sugarcane leaf blight resistance using a two-way pseudo-testcross strategy	41
Maize response to nitrogen and phosphorus starter fertilisation in mineral-fertilised or manured systems	41
Straw mulch-based no-tillage improves tillering capability of dryland wheat by reducing asymmetric competition between main stem and tillers	40
Co-overexpression of genes for nitrogen transport, assimilation, and utilization boosts rice grain yield and nitrogen use efficiency	40
Flowering-time regulation by the circadian clock: From Arabidopsis to crops	39
Optimizing nitrogen application increases strip-intercropped maize yields by reshaping root morphology and physiology	39
Mapping of powdery mildew resistance genes transferred to common wheat from wild emmer wheat revealed three functional Pm60 haplotypes	39
Chromosome 5P of Agropyron cristatum induces chromosomal translocation by disturbing homologous chromosome pairing in a common wheat background	39
Natural and artificial evolution of acetolactate synthase for crop breeding	38
J-family genes redundantly regulate flowering time and increase yield in soybean	38
Genetic dissection and validation of a new dominant QTL associated with chlorophyll content and its regulatory networks analysis in soybean	35
Towards cultivar-oriented gene discovery for better crops	35
Fine-mapping and candidate gene identification for QPtn.sau-4B showing potential in increasing productive tiller number and yield in wheat	35
Editorial Board	34
ZmMs33 promotes anther elongation via modulating cell elongation regulators, metabolic homeostasis, and cell wall remodeling in maize	34
Editorial Board	34
Fine mapping and validation of a stable QTL for thousand-kernel weight in wheat (Triticum aestivum L.)	34
Enemies at peace: Recent progress in Agrobacterium-mediated cereal transformation	33
Reduction of uncertainties in rice yield response to elevated CO2 by experiment-model integration: A case study in East China	33
GmSTF accumulation mediated by DELLA protein GmRGAs contributes to coordinating light and gibberellin signaling to reduce plant height in soybean	33
Integrated multi-omics reveals contrasting epigenetic patterns in leaf and root morphogenesis in Aegilops speltoides	33
The prevalence of deleterious mutations during the domestication and improvement of soybean	33
BEAR1, a bHLH transcription factor, controls seedling growth by regulating gibberellins biosynthesis in rice	33
Calmodulins and calmodulin-like proteins-mediated plant organellar calcium signaling networks under abiotic stress	32
Past and recent advances in sugarcane cytogenetics	32
ABA-activated subclass III SnRK2s control kernel maturation in maize	32
Rice transcription factors OsLBD37/38/39 regulate nitrate uptake by repressing OsNRT2.1/2.2/2.3 under high-nitrogen conditions	32
A single-nucleus transcriptomic atlas of peanut seedlings unveils gene regulatory dynamics governing hypocotyl development	32
Profiling seed soluble sugar compositions in 1164 Chinese soybean accessions from major growing ecoregions	32
Barley FASCIATED EAR genes determine inflorescence meristem size and yield traits	32
Cloning of a new allele of ZmAMP1 and evaluation of its breeding value in hybrid maize	32
Vitamin and zeatin treatments promote colchicine-induced haploid chromosome doubling in maize	31
Comparative DNA-methylome and transcriptome analysis reveals heterosis- and polyploidy-associated epigenetic changes in rice	31
Haplotype variation and KASP markers for SiPSY1 – A key gene controlling yellow kernel pigmentation in foxtail millet	31
The cotton mitochondrial chimeric gene orf610a causes male sterility by disturbing the dynamic balance of ATP synthesis and ROS burst	31
A high-resolution 20K SNP array for comprehensive genotyping and genetic mapping in Nicotiana tabacum L.	30
Ectopic expression of OsNF-YA8, an endosperm-specific nuclear factor Y transcription-factor gene, causes vegetative and reproductive development defects in rice	30
Remote sensing of quality traits in cereal and arable production systems: A review	30
Chloride-dependent plasma membrane hyperpolarization confers superior salinity tissue tolerance in wild rice Oryza coarctata	30
faCRSA: An automated pipeline for high-throughput analysis of crop root system architecture	30
Genomic prediction of yield performance among single-cross maize hybrids using a partial diallel cross design	30

Molecular cytogenetic analyses of two new wheat-rye 6RL translocation lines with resistance to wheat powdery mildew	30
Assembly and phylogenomic analysis of cotton mitochondrial genomes provide insights into the history of cotton evolution	30
Elite, transformable haploid inducers in maize	29
Effects of dense planting patterns on photosynthetic traits of different vertical layers and yield of wheat under different nitrogen rates	29
TaMADS2-3D, a MADS transcription factor gene, regulates phosphate starvation responses in plants	29
A near-complete genome assembly for northern wild rice (Zizania palustris L.)	29
Development of a target capture sequencing SNP genotyping platform for genetic analysis and genomic breeding in rapeseed	29
Calcium/calmodulin modulates salt responses by binding a novel interacting protein SAMS1 in peanut (Arachis hypogaea L.)	29
OsSPL10 controls trichome development by interacting with OsWOX3B at both transcription and protein levels in rice (Oryza sativa L.)	28
CRISPR/Cas9-mediated editing of ZmNRAMPL5 generates maize with reduced cadmium accumulation and uncompromised yield	28
OsNPF3.1, a member of the NRT1/PTR family, increases nitrogen use efficiency and biomass production in rice	28
Editorial Board	28
Fine mapping and candidate gene analysis of qHD1b, a QTL that promotes flowering in common wild rice (Oryza rufipogon) by up-regulating Ehd1	28
Dynamic patterns of the translatome in a hybrid triplet show translational fractionation of the maize subgenomes	28
Inheritance of marsh spot disease resistance in cranberry common bean (Phaseolus vulgaris L.)	27
Research progress on the divergence and genetic basis of agronomic traits in xian and geng rice	27
Editorial Board	27
Camellia sinensis CsMYB4a participates in regulation of stamen growth by interaction with auxin signaling transduction repressor CsAUX/IAA4	27
Optimal interspecific distance maintains soybean yield by promoting canopy–root synergy in a maize–soybean relay strip cropping system	27
Efficient genetic transformation and gene editing in Erigeron breviscapus using developmental regulators	27
Leveraging the potential of big genomic and phenotypic data for genome-wide association mapping in wheat	27
TaJAZ1-mediated transcriptional regulation of starch biosynthesis synergistically enhances resistant starch content and yield in wheat	27
Development and identification of wheat–Psathyrostachys huashanica 7NsS small segment translocation lines with early heading date gene Ehd-7Ns	26
Host-induced gene silencing of multiple pathogenic factors of Sclerotinia sclerotiorum confers resistance to Sclerotinia rot in Brassica napus	26
Transcription factor BnaA1.WRKY53 is involved in regulation of auxin-induced leaf curling under boron deficiency in Brassica napus	26
Synergistic effects of planting density and nitrogen fertilization on chlorophyll degradation and leaf senescence after silking in maize	26
Genome-wide analysis of soybean DnaJA-family genes and functional characterization of GmDnaJA6 responses to saline and alkaline stress	26
Effects of water deficit and high N fertilization on wheat storage protein synthesis, gluten secondary structure, and breadmaking quality	26
A 9.5-kb deletion in the 1st intron of OsMADS51 enhances temperature sensitivity in rice	25
The plasmodesmata-associated β-1,3-glucanase gene GhPdBG regulates fiber development in cotton	25
Editorial Board	24
Development of a wheat material with improved bread-making quality by overexpressing HMW-GS 1Sx2.3* from Aegilops longissima	24
Glucosylceramides containing very long-acyl-chain fatty acid are critical for cotton fiber elongation by influencing brassinosteroid synthesis and signaling	24
PDIL2-3 encoding a protein disulfide isomerase-like enzyme is essential for grain yield and appearance quality in rice (Oryza sativa L.)	24
Editorial Board	24
Editorial Board	24
Rice AGL1 determines grain size and sterile lemma identity	24
qLTS5/OsALA4 encodes a P4-ATPase that positively regulates cold tolerance in rice seedlings	24
Natural variation of ClCCT promoter promotes flowering and dwarfing in adlay (Coix lacryma-jobi L.)	23
Phosphatase member TaPP2C62-2A cooperates with downstream partners to regulate drought response in wheat	23
Genetic dissection of yield-related traits in response to drought stress in common bean	23
Genetic basis of the mucilage secretion ability associated with nitrogen fixation from aerial roots of maize inbred lines under low nitrogen conditions	23
The BEL1-like transcription factor GhBLH5-A05 participates in cotton response to drought stress	23
The transcriptional landscape of the developmental switch from regular pollen maturation towards microspore-derived plant regeneration in barley	23
Two types of cinnamoyl-CoA reductase function divergently in accumulation of lignins, flavonoids and glucosinolates and enhance lodging resistance in Brassica napus	23
Integrated linkage mapping and genome-wide association study to dissect the genetic basis of zinc deficiency tolerance in maize at seedling stage	23
Origin of the presence/absence variation of the LTIA1/LTIA2 mini-ribonuclease III genes required for low-temperature growth in rice	22
Arginine promotes seed energy metabolism, increasing wheat seed germination at low temperature	22
Establishment of a novel engineering breeding technology for cytoplasmic male sterility	22
Improving maize growth and development simulation by integrating temperature compensatory effect under plastic film mulching into the AquaCrop model	22
Seedling defoliation of cereal crops increases peanut growth and yield in an intercropping system	22
Influence of seven levels of chemical/biostimulator protection on amino acid profile and yield traits in wheat	22
Cultivar difference in rice leaf color change during the later reproductive stage and its relationship with grain filling and nitrogen level	22
R3-MYB proteins OsTCL1 and OsTCL2 modulate seed germination via dual pathways in rice	22
Plant aquaporins: Their roles beyond water transport	22
CRISPR–Cas9-mediated promoter editing of FERONIA-Like receptor 13 increases plant growth and disease resistance in rice	21
Micro-ridge-furrow planting increases rapeseed yield and resource utilization efficiency through optimizing field microenvironment and light-nitrogen matching	21
Genes controlling grain chalkiness in rice	21
Copy number variation of B1 controls awn length in wheat	21
Synthetic metabolic engineering of functional crops: Boosting nutrition and human health	21
Genome-wide investigation of defensin genes in peanut (Arachis hypogaea L.) reveals AhDef2.2 conferring resistance to bacterial wilt	21
Comparative transcriptome analyses reveal that the MsNST1 gene affects lignin synthesis in alfalfa (Medicago sativa L.)	21
Fiber-specific increase of carotenoid content promotes cotton fiber elongation by increasing abscisic acid and ethylene biosynthesis	20
Senescence-associated changes in mineral nutrients in rice leaves and their relationship with ROS homeostasis as affected by nitrogen deficiency	20
Rice melatonin deficiency causes premature leaf senescence via DNA methylation regulation	20
A new strategy of molecular breeding for optimal heading date and grain yield in rice by modulating elite allelic combinations of Ghd7, Hd3a, RFT1 and Gn1a	20
A differentially methylated region of the ZmCCT10 promoter affects flowering time in hybrid maize	20
Corrigendum to “GmTOC1b negatively regulates resistance to Soybean mosaic virus”. [Crop J. 11 (2023) 1762–1773]	20
The dual role of casein kinase 1, DTG1, in regulating tillering and grain size in rice	20
DCL2-dependent regulation of sRNA biogenesis and translocation in soybean	20
Integrated genomic and transcriptomic analysis reveals genes associated with plant height of foxtail millet	20
OsDA1 positively regulates grain width in rice	20
Phosphorylation regulation of nitrogen, phosphorus, and potassium uptake systems in plants	19
A growth-regulating factor 7 (GRF7)-mediated gene regulatory network promotes leaf growth and expansion in sugarcane	19
The pentatricopeptide repeat protein AL5 modulates early chloroplast development in rice	19
Low N apparent surplus with higher rice yield under long-term fertilizer postponing in the rice–wheat cropping system	19
Advances in deciphering salt tolerance mechanism in maize	19
Functional characterization of the effects of gene TaPLT8 on iron distribution in different wheat organs	19
RNAi technologies for insect control in crop protection	19
Contrasting patterns of accumulation, partitioning, and remobilization of biomass and phosphorus in a maize cultivar	19

CNGC20 plays dual roles in regulating plant growth and immunity in Brassica napus	19
Identification of candidate genes for aphid resistance in upland cotton by QTL mapping and expression analysis	19
Estimating wheat spike-leaf composite indicator (SLI) dynamics by coupling spectral indices and machine learning	18
A novel genomic prediction method combining randomized Haseman-Elston regression with a modified algorithm for Proven and Young for large genomic data	18
Poor development of spike differentiation triggered by lower photosynthesis and carbon partitioning reduces summer maize yield after waterlogging	18
Involvement of IbHY5-NO-IbHAM1-IbSOS1 signaling module in mediating red-emissive carbon dots increased salt tolerance in sweetpotato	18
Editorial Board	18
DaMYB75 and DaMYB56 antagonistically regulate anthocyanin biosynthesis by binding to the DaANS promoter in Dioscorea alata	18
Time-resolved multiomics analysis of the genetic regulation of maize kernel moisture	18
Omics big data for crop improvement: Opportunities and challenges	18
Evapotranspiration partitioning and crop water productivity under varying planting densities of maize in north China	18
Phytoene synthase gene GbDYA modulates carotenoids accumulation and confers yellow anther and pollen antioxidant activity in cotton	18
Three co-located resistance genes confer resistance to leaf rust and stripe rust in wheat variety Borlaug 100	18
Green manure returning improves wheat yield and N utilization efficiency by minimizing N loss in Oasis irrigation area of China	18
Fine mapping of a major QTL qHYF_B06 for peanut yield	17
TaARPC5 is required for wheat defense signaling in response to infection by the stripe rust fungus	17
Genetic dissection of drought resistance for trait improvement in crops	17
Development of a single transcript CRISPR/Cas9 toolkit for efficient genome editing in autotetraploid alfalfa	17
Development of plant cytosine base editors with the Cas12a system	17
CRISPR/Cas9-engineered mutation to identify the roles of phytochromes in regulating photomorphogenesis and flowering time in soybean	17
Effects of nitrogen fertilizer on protein synthesis, accumulation, and physicochemical properties in common buckwheat	17
Editing-overexpression coupling system synchronizes photosynthetic enhancement, yield optimization, and abiotic stress tolerance in rice	17
A rare natural variation in TaFT-D2 underlies QTss.cas-3D associated with increased total spikelet number per spike in wheat	17
High-throughput phenotyping of plant leaf morphological, physiological, and biochemical traits on multiple scales using optical sensing	17
Rice3K56 is a high-quality SNP array for genome-based genetic studies and breeding in rice (Oryza sativa L.)	17
Differing responses of root morphology and physiology to nitrogen application rates and their relationships with grain yield in rice	16
Recent omics progress in nanobiotechnology for plant abiotic stress tolerance improvement	16
Nitrogen sources and sinks – Understanding the fate of nitrogen fertiliser when applied at various times and quantifying internally remobilised nitrogen in cotton	16
Mechanisms of autophagy function and regulation in plant growth, development, and response to abiotic stress	16
ABA biosynthesis rather than ABA catabolism is induced by low temperature and inhibits seed germination by activating OsTPP3	16
GL6.1 integrates grain length regulation and disease resistance via OsWRKY53-mediated signaling in rice	16
Characterization of adult plant leaf rust resistance loci in an international wheat collection using a re-sequencing genotyping system	16
Pratylenchus coffeae effector PcENG3 targets the maize TCTP protein to facilitate parasitism	16
Key genes and mechanisms underlying natural variation of silique length in oilseed rape (Brassica napus L.) germplasm	16
Production, characterization, and potential utility of a newly synthesized allohexaploid wheat Triticum kiharae	16
Exploiting phKL-mediated homoeologous recombinants to map stripe rust resistance gene YrAev from Aegilops variabilis	16
The ABA synthesis enzyme allele OsNCED2 promotes dryland adaptation in upland rice	15
Rice ONAC005-OsMADS50-OsMADS56 interaction downregulates OsLFL1 in promoting long-day-dependent flowering	15
Disruption of LEAF LESION MIMIC 4 affects ABA synthesis and ROS accumulation in rice	15
The rice miR171b–SCL6-IIs module controls blast resistance, grain yield, and flowering	15
Late spring cold reduces grain number at various spike positions by regulating spike growth and assimilate distribution in winter wheat	15
New transcriptomic insights in two RNAi wheat lines with the gliadins strongly down-regulated by two endosperm specific promoters	15
Genetic improvement of legume roots for adaption to acid soils	15
Dynamic and adaptive membrane lipid remodeling in leaves of sorghum under salt stress	15
Salvia miltiorrhiza-derived carbon dots confer resistance to Sclerotinia sclerotiorum in Brassica napus L.	15
LociScan, a tool for screening genetic marker combinations for plant variety discrimination	15
Cob color, an indicator of grain dehydration and agronomic traits in maize hybrids	15
Increasing Fusarium verticillioides resistance in maize by genomics-assisted breeding: Methods, progress, and prospects	15
Enhancing faba bean breeding efficiency through insect pollination and smart crossing schemes	15
Rewiring autoactive NLRs into protease-activated switches for broad-spectrum plant immunity	15
Multi-omics analysis reveals the pivotal role of phytohormone homeostasis in regulating maize grain water content	15
Identification of new cotton fiber-quality QTL by multiple genomic analyses and development of markers for genomic breeding	14
Genetic architecture of embryo size and related traits in maize	14
Functional conservation and divergence of miR156 and miR529 during rice development	14
Chalcone isomerase gene (OsCHI3) increases rice drought tolerance by scavenging ROS via flavonoid and ABA metabolic pathways	14
Far-red light: A regulator of plant morphology and photosynthetic capacity	14
QTG-LGBM: A method of prioritizing causal genes in quantitative trait loci in maize	14
Filtering for SNPs with high selective constraint augments mid-parent heterosis predictions in wheat (Triticum aestivum L.)	14
Detecting winter canola (Brassica napus) phenological stages using an improved shape-model method based on time-series UAV spectral data	14
Multiple omics datasets reveal significant physical and physiological dormancy in alfalfa hard seeds identified by multispectral imaging analysis	14
Introgression of chromosome 6PL terminal segment from Agropyron cristatum to increase both grain number and grain weight in wheat	14
Increased sugar content impairs pollen fertility and reduces seed-setting in high-photosynthetic-efficiency rice	14
Editorial Board	14
In silico curation of QTL-rich clusters and candidate gene identification for plant height of bread wheat	14
Genome-wide association mapping and genomic prediction of stalk rot in two mid-altitude tropical maize populations	14
Interplay of light and nitrogen for plant growth and development	14
The R2R3-MYB transcription factor GaPC controls petal coloration in cotton	14
TaGSK3 controls wheat lateral root developmental plasticity under salt stress	13
Ethylene accelerates maize leaf senescence in response to nitrogen deficiency by regulating chlorophyll metabolism and autophagy	13
Characterization and distribution of novel alleles of the vernalization gene Vrn-A1 in Chinese wheat (Triticum aestivum L.) cultivars	13
Genome-wide recombination variation in biparental segregating and reciprocal backcross populations provides information for introgression breeding in Brassica napus	13
Genetic analysis of GEFs and GDIs in rice reveals the roles of OsGEF5, OsGDI1, and OsGEF3 in the regulation of grain size and plant height	13
Safener-mediated increase in yield components of common buckwheat	13
PlantGaussian: Exploring 3D Gaussian splatting for cross-time, cross-scene, and realistic 3D plant visualization and beyond	13
High-throughput phenotyping discovers new stable loci controlling senescence rate in bread wheat	13
How to select favorable and promising alleles and genotypes for breeding: A case study of rice blast resistance genes in Southern and Northeastern China	13
Fine mapping of two recessive genes TaFLA1 and TaSPL8 controlling flag leaf angle in bread wheat	13
Development and identification of two novel wheat-rye 6R derivative lines with adult-plant resistance to powdery mildew and high-yielding potential	13
MORF1 regulates the editing of orf224 transcript to modulate fertility in the polima cytoplasmic male sterility system of Brassica napus L.	13
SPM-IS: An auto-algorithm to acquire a mature soybean phenotype based on instance segmentation	13
Selenium–nitrogen-co-doped carbon dots increase rice seedling growth and salt resistance	13
Genetic architecture of quantitative trait loci (QTL) for FHB resistance and agronomic traits in a hard winter wheat population	13
BnbHLH92a negatively regulates anthocyanin and proanthocyanidin biosynthesis in Brassica napus	13
BnaC03.BIN2 regulates plant height by affecting the main inflorescence length and first effective branch height in Brassica napus L.	12
Harnessing metabolomics for enhanced crop drought tolerance	12
OsTHA8 encodes a pentatricopeptide repeat protein required for RNA editing and splicing during rice chloroplast development	12
The chloroplast-localized protein LTA1 regulates tiller angle and yield of rice	12
Biochemical factors of maize silks associated with host susceptibility to Fusarium graminearum	12
Crop wild relatives: Harnessing ancestral diversity for future food security	12
Editorial Board	12
GhIQD10 interacts with GhCaM7 to control cotton fiber elongation via calcium signaling	12
An OVATE family protein GmOFP8 increases drought tolerance and nodule formation in soybean	12
Fine-mapping and characterisation of genes on barley (Hordeum vulgare) chromosome 2H for salinity stress tolerance during germination	12
Curly leaf 1, a CHD domain-containing protein, regulates leaf development by H3K27me3 modification in rice	12
HTPRootSlides: A high-throughput phenotyping platform for crop root germination dynamic screening	12