Communications Biology

Article	Citations
Reflecting on the Communications Biology Editor Training Program	915
Inferring single-cell and spatial microRNA activity from transcriptomics data	268
A multi-tissue longitudinal proteomics study to evaluate the suitability of post-mortem samples for pathophysiological research	256
Single-cell RNA-seq data augmentation using generative Fourier transformer	239
Arabidopsis conditional photosynthesis mutants abc1k1 and var2 accumulate partially processed thylakoid preproteins and are defective in chloroplast biogenesis	168
Positively charged cytoplasmic residues in corin prevent signal peptidase cleavage and endoplasmic reticulum retention	167
Uncovering narrative aging: an underlying neural mechanism compensated through spatial constructional ability	167
Small molecules and heat treatments reverse vernalization via epigenetic modification in Arabidopsis	167
DDX1 is required for non-spliceosomal splicing of tRNAs but not of XBP1 mRNA	166
A global palaeo-science community: an interview with Pal(a)eoPERCS	163
Viral genomic features predict Orthopoxvirus reservoir hosts	161
Proteomic analyses reveal the key role of gene co-option in the evolution of the scaly-foot snail scleritome	146
Resveratrol does not mimic the positive effects of calorie restriction on lifespan in Microcebus murinus	142
Identification of coevolving positions by ancestral reconstruction	138
Elucidating shared genetic association between female body mass index and preeclampsia	131
Defective X-chromosome inactivation and cancer risk in women	127
Nuclear mechano-confinement induces geometry-dependent HP1α condensate alterations	127
RBPMS inhibits bladder cancer metastasis by downregulating MYC pathway through alternative splicing of ANKRD10	126
One-step Cre-loxP organism creation by TAx9	124
Integrated transcriptomic profiling reveals a STING-mediated Type II Interferon signature in SOD1-mutant amyotrophic lateral sclerosis models	116
Distinct neural representations of different linguistic components following sign language learning	116
Diversification and extinction of Hemiptera in deep time	115
Densely vascularized thick 3D tissue shows enhanced protein secretion constructed with intermittent positive pressure	109
New mouse models for exploring renal tumor extension into the inferior vena cava	106
Developmental air pollution exposure augments airway hyperreactivity, alters transcriptome, and DNA methylation in female adult progeny	104

Infusing structural assumptions into dimensionality reduction for single-cell RNA sequencing data to identify small gene sets	99
The eukaryotic-like characteristics of small GTPase, roadblock and TRAPPC3 proteins from Asgard archaea	99
A miniature dialysis-culture device allows high-density human-induced pluripotent stem cells expansion from growth factor accumulation	98
Direct and indirect pathways for heterosynaptic interaction underlying developmental synapse elimination in the mouse cerebellum	97
Newly detected data from Haestasaurus and review of sauropod skin morphology suggests Early Jurassic origin of skin papillae	96
Development of an arteriolar niche and self-renewal of breast cancer stem cells by lysophosphatidic acid/protein kinase D signaling	95
Generation of transgenic mice expressing a FRET biosensor, SMART, that responds to necroptosis	92
Oxygen tension modulates the mitochondrial genetic bottleneck and influences the segregation of a heteroplasmic mtDNA variant in vitro	90
Structural and dynamical investigation of histone H2B in well-hydrated nucleosome core particles by solid-state NMR	89
The lexicon of antimicrobial peptides: a complete set of arginine and tryptophan sequences	87
DLST-dependence dictates metabolic heterogeneity in TCA-cycle usage among triple-negative breast cancer	86
The ATF2/miR-3913-5p/CREB5 axis is involved in the cell proliferation and metastasis of colorectal cancer	86
The origins of haplotype 58 (H58) Salmonella enterica serovar Typhi	85
Cryo-EM structure of transmembrane AAA+ protease FtsH in the ADP state	84
The purine metabolite inosine monophosphate accelerates myelopoiesis and acute pancreatitis progression	81
Asymmetric conformations of cleaved HIV-1 envelope glycoprotein trimers in styrene-maleic acid lipid nanoparticles	78
Neurocognitive biases from the lab to real life	77
Gut mycobiota alterations in patients with COVID-19 and H1N1 infections and their associations with clinical features	76
Neck and capsid architecture of the robust Agrobacterium phage Milano	71
Multiple ageing effects on testicular/epididymal germ cells lead to decreased male fertility in mice	71
SLAPSHOT reveals rapid dynamics of extracellularly exposed proteome in response to calcium-activated plasma membrane phospholipid scrambling	71
Efficient end-to-end learning for cell segmentation with machine generated weak annotations	69
A data-driven crop model for maize yield prediction	68
Vibrio cholerae senses human enteric α-defensin 5 through a CarSR two-component system to promote bacterial pathogenicity	68
Integrative multi-omics analysis reveals the translational landscape of the plant-parasitic nematode Meloidogyne incognita	67
Neuroeconomically dissociable forms of mental accounting are altered in a mouse model of diabetes	67
Chromatin environment-dependent effects of DOT1L on gene expression in male germ cells	67
Disability shouldn’t limit accessibility in science	67
TDP-43 nuclear retention is antagonized by hypo-phosphorylation of its C-terminus in the cytoplasm	66
A hammerhead ribozyme selects mechanically stable conformations for catalysis against viral RNA	65
Author Correction: Comparative genomics reveal a novel phylotaxonomic order in the genus Fusobacterium	64
Identification of selective SWI/SNF dependencies in enzalutamide-resistant prostate cancer	64
The medial and lateral orbitofrontal cortex jointly represent the cognitive map of task space	63
Pivotal roles of Plasmodium falciparum lysophospholipid acyltransferase 1 in cell cycle progression and cytostome internalization	63
Enhanced genome editing with a Streptococcus equinus Cas9	62
Zika virus modulates human fibroblasts to enhance transmission success in a controlled lab-setting	62
A review of quorum-sensing and its role in mediating interkingdom interactions in the ocean	62
Protein structure and interactions elucidated with in-cell NMR for different cell cycle phases and in 3D human tissue models	62
Constant learning - an interview with Lilian Kabeche on setting up an inclusive and welcoming lab	61
Genomic hallmarks of endocrine therapy resistance in ER/PR+HER2- breast tumours	61
Urinary bacteriophage cooperation with bacterial pathogens during human urinary tract infections supports lysogenic phage therapy	61
A signal transmission strategy driven by gap-regulated exonuclease hydrolysis for hierarchical molecular networks	60
Human immune and gut microbial parameters associated with inter-individual variations in COVID-19 mRNA vaccine-induced immunity	60
Compromise or choose: shared movement decisions in wild vulturine guineafowl	59
Computational design of highly efficient thermostable MHET hydrolases and dual enzyme system for PET recycling	59
Eigenmode-based approach reveals a decline in brain structure–function liberality across the human lifespan	59
Nuclear preservation in the cartilage of the Jehol dinosaur Caudipteryx	58
Shedding of N-acetylglucosaminyltransferase-V is regulated by maturity of cellular N-glycan	58
Physiological and pathophysiological functions of NLRP6: pro- and anti-inflammatory roles	58
Confined environments induce polarized paraspeckle condensates	57

Inhibition of VMAT2 by β2-adrenergic agonists, antagonists, and the atypical antipsychotic ziprasidone	57
Critical scaling of whole-brain resting-state dynamics	56
Transposons contribute to the acquisition of cell type-specific cis-elements in the brain	55
Iron commensalism of mesenchymal glioblastoma promotes ferroptosis susceptibility upon dopamine treatment	55
Disrupting iron homeostasis can potentiate colistin activity and overcome colistin resistance mechanisms in Gram-Negative Bacteria	54
Development of an epigenetic clock resistant to changes in immune cell composition	53
Gliding motility of the diatom Craspedostauros australis coincides with the intracellular movement of raphid-specific myosins	53
Age-related differences in network controllability are mitigated by redundancy in large-scale brain networks	53
Two novel genomes of fireflies with different degrees of sexual dimorphism reveal insights into sex-biased gene expression and dosage compensation	53
Microgravity environment grown crystal structure information based engineering of direct electron transfer type glucose dehydrogenase	53
Training the trainers: an interview with Carol Ibe on the importance of building networks for agricultural research in African countries	52
PTOV1 interacts with ZNF449 to promote colorectal cancer development	52
Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase	52
En route to precision medicine for mental health: World Mental Health Day 2021	52
Neuronal correlates of endogenous selective attention in the endbrain of crows	52
HIF1A facilitates hypoxia-induced changes in H3K27ac modification to promote myometrial contractility	52
Oh lazy sister, where art thou?	52
BABEL: using deep learning to translate between single-cell datasets	51
Nurturing gut-brain research: an interview with Helen Vuong on the maternal microbiome in neurodevelopment	51
Scientific QUEERies: an interview with Scott Cocker and Kyle Shanebeck on improving LGBTQ2S+ visibility in STEM	51
Diverse but unique astrocytic phenotypes during embryonic stem cell differentiation, culturing and development	50
Single-cell transcriptomics of the goldfish retina reveals genetic divergence in the asymmetrically evolved subgenomes after allotetraploidization	50
Meta-analysis identifies native priority as a mechanism that supports the restoration of invasion-resistant plant communities	50
Lacticaseibacillus rhamnosus Probio-M9 extends the lifespan of Caenorhabditis elegans	50
Molecular mechanism of proteolytic cleavage-dependent activation of CadC-mediated response to acid in E. coli	50
Combined acid hydrolysis and fermentation improves bioactivity of citrus flavonoids in vitro and in vivo	49
Age-associated aberrations of the cumulus-oocyte interaction and in the zona pellucida structure reduce fertility in female mice	49
Co-transcriptional splicing efficiency is a gene-specific feature that can be regulated by TGFβ	49
Relay and higher-order thalamic nuclei show an intertwined functional association with cortical-networks	49
Dog brains are sensitive to infant- and dog-directed prosody	49
A MYCN-driven de-differentiation profile identifies a subgroup of aggressive retinoblastoma	48
Wildfires disproportionately affected jaguars in the Pantanal	48
Inhibition of the medial amygdala disrupts escalated aggression in lactating female mice after repeated exposure to male intruders	48
Rooting through single-cell sequencing in phloem pole cells	48
miR-124 coordinates metabolic regulators acting at early stages of human neurogenesis	48
Frontoparietal network activation is associated with motor recovery in ischemic stroke patients	48
Environmental conditions dictate differential evolution of vancomycin resistance in Staphylococcus aureus	48
Integration of epigenetic and genetic profiles identifies multiple sclerosis disease-critical cell types and genes	48
14-3-3 proteins inactivate DAPK2 by promoting its dimerization and protecting key regulatory phosphosites	48
Multifaceted regulation of siderophore synthesis by multiple regulatory systems in Shewanella oneidensis	48
Predicting the potential for zoonotic transmission and host associations for novel viruses	48
FOXG1 promotes osteogenesis of bone marrow-derived mesenchymal stem cells by activating autophagy through regulating USP14	47
Toxic plants act as indiscriminate protectors of insects	47
Intranasally administrated fusion-inhibitory lipopeptides block SARS-CoV-2 infection in mice and enable long-term protective immunity	47
Neural representation of sensorimotor features in language-motor areas during auditory and visual perception	46
Double and single stranded detection of 5-methylcytosine and 5-hydroxymethylcytosine with nanopore sequencing	46
USP35 promotes the growth of ER positive breast cancer by inhibiting ferroptosis via BRD4-SLC7A11 axis	46
Human cytomegalovirus UL82 promotes cell cycle progression of colorectal cancer by upregulating AGR2	46
Aging disrupts the link between network centrality and functional properties of prefrontal neurons during memory-guided behavior	46
Single cell transcriptome profiling reveals pathogenesis of bullous pemphigoid	46
Higher-order structures of the foot-and-mouth disease virus RNA-dependent RNA polymerase required for genome replication	45
KDM5C and KDM5D mutations have different consequences in clear cell renal cell carcinoma cells	45
Machine learning with label-free Raman microscopy to investigate ferroptosis in comparison with apoptosis and necroptosis	45
Precise control of embolic stroke with magnetized red blood cells in mice	45
DNA methylation differences between cord and adult white blood cells reflect postnatal immune cell maturation	45
An integrated multi-omics analysis identifies protein biomarkers and potential drug targets for psoriatic arthritis	45
Multiple kinesins speed up cargo transport in crowded environments by sharing load	45
Expression of divergent methyl/alkyl coenzyme M reductases from uncultured archaea	45
Functional compartmentalization of hepatic mitochondrial subpopulations during MASH progression	45
NK cell depletion in bispecific antibody therapy is associated with lack of HIV control after ART interruption	45
Activated endothelial cells induce a distinct type of astrocytic reactivity	45
Coevolution of the Tlx homeobox gene with medusa development (Cnidaria: Medusozoa)	44
Androgen receptor variant shows heterogeneous expression in prostate cancer according to differentiation stage	44
Mouse and human antibodies bind HLA-E-leader peptide complexes and enhance NK cell cytotoxicity	44
Cuticular hydrocarbons are associated with mating success and insecticide resistance in malaria vectors	44
Sperm membrane proteins DCST1 and DCST2 are required for sperm-egg interaction in mice and fish	44
Lévy walk dynamics explain gamma burst patterns in primate cerebral cortex	44
Complex population structure of the Atlantic puffin revealed by whole genome analyses	43
Decreased left heart flow in fetal lambs causes left heart hypoplasia and pro-fibrotic tissue remodeling	43
Paradoxical pharmacological dissociations result from drugs that enhance delta oscillations but preserve consciousness	43
Activation-inducible CAR expression enables precise control over engineered CAR T cell function	43
Author Correction: Chromosomal scale assembly of parasitic wasp genome reveals symbiotic virus colonization	43
A draft genome of Drung cattle reveals clues to its chromosomal fusion and environmental adaptation	43
Author Correction: Accumulation of formaldehyde causes motor deficits in an in vivo model of hindlimb unloading	43
Self-supervised machine learning for live cell imagery segmentation	43
In vitro reconstitution of an efficient nucleotide excision repair system using mesophilic enzymes from Deinococcus radiodurans	42
Engineering eukaryote-like regulatory circuits to expand artificial control mechanisms for metabolic engineering in Saccharomyces cerevisiae	42
Silencing the G-protein coupled receptor 3-salt inducible kinase 2 pathway promotes human β cell proliferation	42
Neutrophil-derived reactive oxygen species promote tumor colonization	42
Ancient origin of fucosylated xyloglucan in charophycean green algae	42

The interaction between endogenous GABA, functional connectivity, and behavioral flexibility is critically altered with advanced age	42
Publisher Correction: 3D test sample for the calibration and quality control of stimulated emission depletion (STED) and confocal microscopes	42
Genetic and pharmacological interrogation of cancer vulnerability using a multiplexed cell line screening platform	42
A functional SNP rs895819 on pre-miR-27a is associated with bipolar disorder by targeting NCAM1	42
MicroRNA expression profile in Lampetra morii upon Vibrio anguillarum infection and miR-4561 characterization targeting lip	42
Chromosome-scale genome assembly of the brown anole (Anolis sagrei), an emerging model species	41
Mycelium chemistry differs markedly between ectomycorrhizal and arbuscular mycorrhizal fungi	41
Phenome-wide analysis of Taiwan Biobank reveals novel glycemia-related loci and genetic risks for diabetes	41
Gender disparities in altmetric attention scores for cardiovascular research	41
Interaction effects of the 5-HTT and MAOA-uVNTR gene variants on pre-attentive EEG activity in response to threatening voices	41
Density fluctuations, homeostasis, and reproduction effects in bacteria	41
Author Correction: A yeast-optimized single-cell transcriptomics platform elucidates how mycophenolic acid and guanine alter global mRNA levels	41
UDP-glucose pyrophosphorylase as a target for regulating carbon flux distribution and antioxidant capacity in Phaeodactylum tricornutum	41
Sulfur amino acid supplementation displays therapeutic potential in a C. elegans model of Duchenne muscular dystrophy	41
Selective therapeutic strategy for p53-deficient cancer by targeting dysregulation in DNA repair	41
Author Correction: MRI tractography reveals the human olfactory nerve map connecting the olfactory epithelium and olfactory bulb	41
Single-cell reconstruction reveals input patterns and pathways into corticotropin-releasing factor neurons in the central amygdala in mice	40
In vivo pharmacokinetic enhancement of monomeric Fc and monovalent bispecific designs through structural guidance	40
Neural activities in music frogs reveal call variations and phylogenetic relationships within the genus Nidirana	40
Acute and chronic inflammation alter immunometabolism in a cutaneous delayed-type hypersensitivity reaction (DTHR) mouse model	40
USP39 is essential for mammalian epithelial morphogenesis through upregulation of planar cell polarity components	40
Conformational plasticity of the HIV-1 gp41 immunodominant region is recognized by multiple non-neutralizing antibodies	40
Neural signatures associated with temporal compression in the verbal retelling of past events	40
Coral fluorescence: a prey-lure in deep habitats	40
Non-glycosylated IGF2 prohormones are more mitogenic than native IGF2	40
Structures of distant diphtheria toxin homologs reveal functional determinants of an evolutionarily conserved toxin scaffold	40
Salinity tolerance mechanisms of an Arctic Pelagophyte using comparative transcriptomic and gene expression analysis	40
Chord: an ensemble machine learning algorithm to identify doublets in single-cell RNA sequencing data	40
Endoglycosidase assay using enzymatically synthesized fluorophore-labeled glycans as substrates to uncover enzyme substrate specificities	40
Confidence modulates the decodability of scene prediction during partially-observable maze exploration in humans	40
Integrative multi-omic analysis identifies genetically influenced DNA methylation biomarkers for breast and prostate cancers	39
Personalized visual encoding model construction with small data	39
In vitro characterisation of the MS2 RNA polymerase complex reveals host factors that modulate emesviral replicase activity	39
A calcitonin receptor-expressing subregion of the medial preoptic area is involved in alloparental tolerance in common marmosets	39
Genetic architecture of band neutrophil fraction in Iceland	39
DEVOLUTION—A method for phylogenetic reconstruction of aneuploid cancers based on multiregional genotyping data	39
The dynamics of γδ T cell responses in nonhuman primates during SARS-CoV-2 infection	39
Origin of acetylcholine antagonism in ELIC, a bacterial pentameric ligand-gated ion channel	39
Age-related demethylation of the TDP-43 autoregulatory region in the human motor cortex	39
Reformulation of Trivers–Willard hypothesis for parental investment	39
Author Correction: Associative learning and extinction of conditioned threat predictors across sensory modalities	39
Targeting colonic macrophages improves glycemic control in high-fat diet-induced obesity	39
A juvenile locomotor program promotes vocal learning in zebra finches	39
A whole-ecosystem experiment reveals flow-induced shifts in a stream community	39
Lysine-selective molecular tweezers are cell penetrant and concentrate in lysosomes	38
Automated phenotyping of postoperative delirium-like behaviour in mice reveals the therapeutic efficacy of dexmedetomidine	38
Genetic variants associated with platelet count are predictive of human disease and physiological markers	38
Tyramide-conjugated DNA barcodes enable signal amplification for multiparametric CODEX imaging	38
Structural dynamics of RAF1-HSP90-CDC37 and HSP90 complexes reveal asymmetric client interactions and key structural elements	38
Membrane-mediated interaction of non-conventional snake three-finger toxins with nicotinic acetylcholine receptors	38
Arabidopsis nitrate-induced aspartate oxidase gene expression is necessary to maintain metabolic balance under nitrogen nutrient fluctuation	38
Systems-wide analysis revealed shared and unique responses to moderate and acute high temperatures in the green alga Chlamydomonas reinhardtii	38
Reward expectation enhances action-related activity of nigral dopaminergic and two striatal output pathways	38
Hippocampal subfield plasticity is associated with improved spatial memory	38
Half-millennium evidence suggests that extinction debts of global vertebrates started in the Second Industrial Revolution	38
Adaptive optimization of the OXPHOS assembly line partially compensates lrpprc-dependent mitochondrial translation defects in mice	38
Author Correction: Accumulation of formaldehyde causes motor deficits in an in vivo model of hindlimb unloading	38
Combining genomic and epidemiological data to compare the transmissibility of SARS-CoV-2 variants Alpha and Iota	38
Electron cryotomography of SARS-CoV-2 virions reveals cylinder-shaped particles with a double layer RNP assembly	38
Protein structure determination in human cells by in-cell NMR and a reporter system to optimize protein delivery or transexpression	37
Loss of adipose ATF3 promotes adipose tissue lipolysis and the development of MASH	37
Structural insight into the activation mechanism of MrgD with heterotrimeric Gi-protein revealed by cryo-EM	37
Climate, currents and species traits contribute to early stages of marine species redistribution	37
Poly ADP-ribosylation of SET8 leads to aberrant H4K20 methylation in mammalian nuclear genome	37
Single-cell transcriptomes reveal a molecular link between diabetic kidney and retinal lesions	37
Author Correction: Hidden paths to endless forms most wonderful: ecology latently shapes evolution of multicellular development in predatory bacteria	37
A modeling framework for determining modulation of neural-level tuning from non-invasive human fMRI data	37
L1CAM is required for early dissemination of fallopian tube carcinoma precursors to the ovary	37
Widespread bacterial diversity within the bacteriome of fungi	37
A 16th century Escherichia coli draft genome associated with an opportunistic bile infection	37
Towards 3D basic theories of plant forms	37
A proof-of-concept study on the genomic evolution of Sars-Cov-2 in molnupiravir-treated, paxlovid-treated and drug-naïve patients	37
A memory-driven auditory program ensures selective and precise vocal imitation in zebra finches	37
The intra-mitochondrial O-GlcNAcylation system rapidly modulates OXPHOS function and ROS release in the heart	36
Functional evolutionary convergence of long noncoding RNAs involved in embryonic development	36
Cleaner fish are sensitive to what their partners can and cannot see	36
Considering hormone-sensitive cancers as a single disease in the UK biobank reveals shared aetiology	36
Author Correction: Large size in aquatic tetrapods compensates for high drag caused by extreme body proportions	36
Identifying the serious clinical outcomes of adverse reactions to drugs by a multi-task deep learning framework	36
Sex-specific single cell-level transcriptomic signatures of Rett syndrome disease progression	36
The transcription factor PREP1(PKNOX1) regulates nuclear stiffness, the expression of LINC complex proteins and mechanotransduction	36
FBW7 couples structural integrity with functional output of primary cilia	36
Author Correction: Molecular basis for integrin adhesion receptor binding to p21-activated kinase 4 (PAK4)	36
Learning induces coordinated neuronal plasticity of metabolic demands and functional brain networks	36
Modelling human liver fibrosis in the context of non-alcoholic steatohepatitis using a microphysiological system	36
Artificial intelligence-assisted cryoEM structure of Bfr2-Lcp5 complex observed in the yeast small subunit processome	36
Perceptual decisions interfere more with eye movements than with reach movements	36
Author Correction: An in situ activity assay for lysyl oxidases	36
A metabolic dysfunction-associated steatotic liver acinus biomimetic induces pancreatic islet dysfunction in a coupled microphysiology system	36
EVATOM: an optical, label-free, machine learning assisted embryo health assessment tool	36
Activated-memory T cells influence naïve T cell fate: a noncytotoxic function of human CD8 T cells	35
Mitigating the non-specific uptake of immunomagnetic microparticles enables the extraction of endothelium from human fat	35
A molecular barcode and web-based data analysis tool to identify imported Plasmodium vivax malaria	35
Proactive strategies for an inclusive faculty search process	35
Rapid and biased evolution of canalization during adaptive divergence revealed by dominance in gene expression variability during Arctic charr early development	35