Plant Direct

Papers
(The median citation count of Plant Direct is 2. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-05-01 to 2026-05-01.)
ArticleCitations
A K homology (KH) domain protein identified by a forward genetic screen affects bundle sheath anatomy in Arabidopsis thaliana81
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Cold‐inducible promoter‐driven knockdown of Brachypodium antifreeze proteins confers freezing and phytopathogen susceptibility36
FIMBRIN2 Regulates ABA‐Induced Stomatal Closure by Promoting Microfilament Bundling and Turnover in Arabidopsis Guard Cells36
Identification of Gene Targets for the Sprouting Inhibitor CIPC33
NAC domain transcription factors VNI2 and ATAF2 form protein complexes and regulate leaf senescence33
Photosynthetically active radiation is required for seedling growth promotion by volcanic dacitic tuff breccia (Azomite)32
Automated imaging of duckweed growth and development31
Low‐Cost Custom‐Built Flow Meters for Plant Hydraulic Conductance: Validation of Accuracy, Precision, and Reproducibility29
Comparative Three‐Barcode Phylogenetics and Soil Microbiomes of Planted and Wild Arbutus Strawberry Trees22
Regulatory Coordination of Photophysical, Photochemical, and Biochemical Reactions in the Photosynthesis of Land Plants21
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Dissecting genomic regions and underlying sheath blight resistance traits in rice (Oryza sativaL.) using a genome‐wide association study19
The BnaBPs gene regulates flowering time and leaf angle in Brassica napus19
Identification of new potential downstream transcriptional targets of the strigolactone pathway including glucosinolate biosynthesis18
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Reference nodule transcriptomes for Melilotus officinalis and 17
Systematic prediction of EMS‐induced mutations in a sorghum mutant population16
Dissecting the genetic architecture of sunflower disc diameter using genome‐wide association study16
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Transformation and regeneration of DNA polymerase Θ mutant rice plants16
Systematic expression analysis of cysteine‐rich secretory proteins, antigen 5, and pathogenesis‐related 1 protein (CAP) superfamily in Arabidopsis16
Between Two Extremes: Tripsacum dactyloides Root Anatomical Responses to Drought and Waterlogging16
CRISPR/Cas9‐mediated saturated mutagenesis of the cotton MIR482 family for dissecting the functionality of individual members in disease response15
GABA promotes peroxisome proliferation in Triticum monococcum leaves14
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A strategy for identification and characterization of genic mutations using a temperature‐sensitive chlorotic soybean mutant as an example14
Phytochrome E Plays a Role in the Suppression of Germination in Far‐Red Light in Tomato14
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Solution Structure and NMR Chemical Shift Perturbations of the Arabidopsis BCCP1 Identify Intersubunit Interactions Potentially Involved in the Assembly of the Heteromeric Acetyl‐CoA Carboxylase14
Conserved and variable heat stress responses of the Heat Shock Factor transcription factor family in maize and Setaria viridis14
CUT&Tag for High‐Resolution Epigenomic Profiling From a Low Amount of Arabidopsis Tissue13
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MDF Regulates a Network of Auxin‐Dependent and Auxin‐Independent Pathways of Adventitious Root Regeneration in Arabidopsis13
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Root and Leaf Traits for Dehydration Avoidance and Enhanced Grain Yield in Cowpea ( Vigna unguiculata 13
Establishing an Immune System Conferring DNA and RNA Virus Resistance in Plants Using CRISPR/Cas12a Multiplex Gene Editing13
A Fluorescence‐Based Transient Expression Assay for the Analysis of Upstream Open Reading Frames in Plants13
Toward an Automated System for Nondestructive Estimation of Plant Biomass13
NDH‐1L with a truncated NdhM subunit is unstable under stress conditions in cyanobacteria12
Identification and Evolution of Salt‐Tolerant Genes in Weedy Rice Through High‐Throughput Resequencing12
Transcriptomic and Metabolic Insight Into Flavonoid Biosynthesis Underlying Black and Yellow Seed Coat Color Variation in Soybean ( Glycine max 11
Identification of a xyloglucan beta‐xylopyranosyltransferase from Vaccinium corymbosum11
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Thepho1;2a′‐m1.1allele ofPhosphate1conditions misregulation of the phosphorus starvation response in maize (Zea maysssp.maysL.)11
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Enhanced Pepper Resistance to Sclerotium rolfsii Through Root Development and Enzyme Modulation by11
The rice annexin gene OsAnn5 is involved in cold stress tolerance at the seedling stage11
COP1 mutation causes low leaf temperature under various abiotic stresses in Arabidopsis thaliana11
Shedding light on AT1G29480 of Arabidopsis thaliana—An enigmatic locus restricted to Brassicacean genomes11
Combined Physiological and Transcriptomic Analysis Reveals Key Regulatory Networks and Potential Hub Genes Controlling Chilling Tolerance During Soybean Germination11
Specificity and Selectivity of Raman Spectroscopy for the Detection of Dose‐Dependent Heavy Metal Toxicities11
Suppression of Chorismate Mutase 1 in Hybrid Poplar to Investigate Potential Redundancy in the Supply of Lignin Precursors11
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LeafDNet: Transforming Leaf Disease Diagnosis Through Deep Transfer Learning10
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Albino lethal 13, a chloroplast‐imported protein required for chloroplast development in rice10
Cm SGT1 , Transcriptionally Regulated by CmWRKY21 and CmWRKY31, Improves Powdery Mildew Resistance in 10
A novel CLAVATA1 mutation causes multilocularity in Brassica rapa 10
Genome wide association studies on seven yield‐related traits of 183 rice varieties in Bangladesh10
Leaf Anatomy, Volatile Metabolite Profile, and Cytotoxic Activity of the Endemic Seseli tomentosum 10
Assessment of Seed Priming With Melatonin to Improve Morpho‐Physiological and Biochemical Aspects of Common Bean (Phaseolus vulgaris L.) Under Magnesium Deficiency9
Untargeted Metabolomics Reveals Organ‐Specific and Extraction‐Dependent Metabolite Profiles in Endemic Tajik Species Ferula violacea Korovin9
The rolB‐transgenic Nicotiana tabacum plants exhibit upregulated ARF7 and ARF19 gene expression9
Effect of Low Red‐to‐Far‐Red Light on Stem Elongation and Pith Cell Development in Dicots9
Simultaneous CAS9 editing of cpSRP43, LHCA6, and LHCA7 in Picochlorum celeri lowers chlorophyll levels and improves biomass productivity9
Drought specifically downregulates mineral nutrition: Plant ionomic content and associated gene expression9
ZmRop1 participates in maize defense response to the damage of Spodoptera frugiperda larvae through mediating ROS and soluble phenol production9
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Parasitic‐Plant Parasite Rewires Flowering Pathways to Induce Stem‐Derived Galls9
Delineating genetic regulation of cannabinoid biosynthesis during female flower development in Cannabis sativa 8
A Study on the Response Mechanism of Davidia involucrata Baill. to Drought Stress Based on Transcriptomic Analysis8
The plant endoplasmic reticulum UPRome: A repository and pathway browser for genes involved in signaling networks linked to the endoplasmic reticulum8
Keeping time in the dark: Potato diel and circadian rhythmic gene expression reveals tissue‐specific circadian clocks8
Multi‐Experiment and Multi‐Locus Genome‐Wide Association Mapping for Grain Arsenic in Rice Population8
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Blue‐green fluorescence during hypersensitive cell death arises from phenylpropanoid deydrodimers8
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Determination of the Mechanisms of MCPA Resistance in Amaranthus powellii 8
Phenotypic and transcriptomic analysis reveals early stress responses in transgenic rice expressing Arabidopsis DREB1a8
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Targeted mutagenesis of StISAC stabilizes the production of anthocyanins in potato cell culture8
δ13C as a tool for iron and phosphorus deficiency prediction in crops8
An open source plant kinase chemogenomics set8
The male germ unit association is independently regulated of GUM in Arabidopsis thaliana7
Temporal and environmental factors interact with rootstock genotype to shape leaf elemental composition in grafted grapevines7
Effects of light regimes on circadian gene co‐expression networks in Arabidopsis thaliana7
Combined Analysis of Transcriptome and Metabolome Explains the Differences in Pulp Color in Jackfruit7
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Differences in Phenylpropanoid and Reactive Oxygen Species Genes Drive Plastic and Adaptive Responses to Drought Stress Between Douglas‐Fir Varieties and Hybrids7
Reevaluation of ethylene role in Arabidopsis cauline leaf abscission induced by water stress and rewatering7
Antagonistic functions of CTL1 and SUH1 mediate cell wall assembly in Arabidopsis7
Molecular Characterization of Cytokinin Response Regulator ARR21 in Arabidopsis Seed Development7
Effect of graphene on soybean root colonization by Bradyrhizobium strains7
Plant responses to limited aeration: Advances and future challenges7
The Shock of Shatter: Understanding Silique and Silicle Dehiscence for Improving Oilseed Crops in Brassicaceae7
Effects of Trichoderma harzianum biofertilizer on growth, yield, and quality of Bupleurum chinense7
Integrative physiological and transcriptome analysis unravels the mechanism of low nitrogen use efficiency in burley tobacco6
Light and jasmonic acid coordinately regulate the phosphate responses under shade and phosphate starvation conditions in Arabidopsis6
Localization of proteins involved in the biogenesis and repair of the photosynthetic apparatus to thylakoid subdomains in Arabidopsis6
Correction to “Identification of Novel Candidate Genes Associated With the Symbiotic Compatibility of Soybean With Rhizobia Under Natural Conditions”6
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The melon Fom‐1–Prv resistance gene pair: Correlated spatial expression and interaction with a viral protein6
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Interactions with microbial consortia have variable effects in organic carbon and production of exometabolites among genotypes of Populus trichocarpa6
Screening, Diversity, and Characterization of Fungal Endophytes Isolated From the Halophyte Limonium axillare and the Potential of Biocontrol Antagonists Against Fusarium oxysporum6
PINOID‐centered genetic interactions mediate auxin action in cotyledon formation6
A chemical genetic screen with the EXO70 inhibitor Endosidin2 uncovers potential modulators of exocytosis in Arabidopsis6
Exome‐based new allele‐specific PCR markers and transferability for sodicity tolerance in bread wheat (Triticum aestivum L.)6
Genetic loci associated with freezing tolerance in a European rapeseed (Brassica napus L.) diversity panel identified by genome‐wide association mapping6
PhosBoost: Improved phosphorylation prediction recall using gradient boosting and protein language models6
Correction to “NDH‐1L with a truncated NdhM subunit is unstable under stress conditions in cyanobacteria”5
Myb‐like transcription factors have epistatic effects on circadian clock function but additive effects on plant growth5
In vivo localization of iron starvation induced proteins under variable iron supplementation regimes in Phaeodactylum tricornutum5
The halotolerant rizhobacterium Glutamicibacter sp. alleviates salt impact on Phragmites australis by producing exopolysaccharides and limiting plant sodium uptake5
Soybean Cyst Nematode‐Resistant Protein AATRhg1 Affects Amino Acid Homeostasis and Betalain Accumulation5
Sorghum root epigenetic landscape during limiting phosphorus conditions5
Leaf pigmentation in Cannabis sativa: Characterization of anthocyanin biosynthesis in colorful Cannabis varieties5
Tuning of meristem maturation rate increases yield in multiple Triticum aestivum cultivars5
Expression of a mammalian RNA demethylase increases flower number and floral stem branching in Arabidopsis thaliana 5
Root hydraulic properties: An exploration of their variability across scales5
Conserved cellular patterning in the mesophyll of rice leaves5
Plasticity of Arabidopsis rosette transcriptomes and photosynthetic responses in dynamic light conditions5
The Influence of the Conditions of Cultivation of Lactic Acid Bacteria on Their Antagonistic Activity Against Some Plant Pathogenic Bacteria5
An Arabidopsis Cell Culture With Weak Circadian Rhythms Under Constant Light Compared With Constant Dark Can Be Rescued by ELF35
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Overexpression of CsBRC, an F‐box gene from Camellia sinensis, increased the plant branching in tobacco and rice5
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Genome‐Wide Analysis of the lncRNAs and miRNAs Involved in Flower Development in Radish5
Heritable induced resistance in Arabidopsis thaliana: Tips and tools to improve effect size and reproducibility5
Target‐site mutations Ile1781Leu and Ile2041Asn in the ACCase2 gene confer resistance to fluazifop‐p‐butyl and pinoxaden herbicides in a johnsongrass accession from Arkansas, USA5
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Genome‐wide association analysis of hyperspectral reflectance data to dissect the genetic architecture of growth‐related traits in maize under plant growth‐promoting bacteria inoculation4
Genome and Tissue‐Specific Transcriptome of the Tropical Milkweed ( Asclepias curassavica )4
Unraveling Plant Recombination Patterns: Insights From Genome k‐mers4
Differences in mucilage properties and stomatal sensitivity of locally adapted Zea mays in relation with precipitation seasonality and vapour pressure deficit regime of their native 4
A survey of the Sli gene in wild and cultivated potato4
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Transcriptional analysis in multiple barley varieties identifies signatures of waterlogging response4
Flow similarity model predicts the allometry and allometric covariation of petiole dimensions4
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An atlas of small RNAs from potato4
The isothiocyanate sulforaphane induces respiratory burst oxidase homologue D‐dependent reactive oxygen species production and regulates expression of stress response genes4
Transcriptomic analysis of the defense response in “Cabernet Sauvignon” grape leaf induced by Apolygus lucorum feeding4
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Genomic Markers Associated With Soybean Resistance to the Stem Borer, Dectes texanus (Coleoptera: Cerambycidae)4
Biomass formation and sugar release efficiency of Populus modified by altered expression of a NAC transcription factor4
Genetic variation in hydrogen cyanide potential of perennial sorghum evaluated by colorimetry4
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Metabolomics of related C3 and C4 Flaveria species indicate differences in the operation of photorespiration under fluctuating light4
The gs3 allele from a large‐grain rice cultivar, Akita 63, increases yield and improves nitrogen‐use efficiency4
BdNRT2A and BdNRT3.2 Are the Major Components of the High‐Affinity Nitrate Transport System in Brachypodium distachyon4
Modification of Gene Expression Involved in Alkaloid Production in Opium Poppy by VIGS Combined With Pretreatment of Macerozyme Enzyme4
Glutamate Methylation, a Novel Histone Mark in Diatoms: Mass Spectrometry Identification and Structural Characterization4
Critical parameters for robust Agrobacterium‐mediated transient transformation and quantitative promoter assays in Catharanthus roseus seedlings3
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A bHLH Transcription Factor Confers Salinity Stress Tolerance in Betula platyphylla3
Can omic tools help generate alternative newer sources of edible seed oil?3
Development and Evaluation of an Early Heading Rice Line From the Indica High‐Yielding Variety NSIC Rc 1603
Detection and Quantification of Dysprosium in Plant Tissues3
Nature's Shield: Exploring Nonglandular Trichomes (NGT) as Key Players in Plant Defense Mechanisms3
Analysis of temperature effects on the protein accumulation of the FT–FD module using newly generated Arabidopsis transgenic plants3
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Whole‐genome DNA methylation patterns of Oryza sativa (L.) and Oryza glumaepatula (Steud) genotypes associated with aluminum response3
Intraspecific differences in the photosynthetic responses to chloroplast CO2 and photon flux density at different leaf temperatures of four grapevine cultivars grown in common outdoor condi3
Side‐chain modifications of phyllobilins may not be essential for chlorophyll degradation in Arabidopsis3
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Combining extracellular matrix proteome and phosphoproteome of chickpea and meta‐analysis reveal novel proteoforms and evolutionary significance of clade‐specific wall‐associated events in plant3
Prolonged phloem feeding by the spotted lanternfly, an invasive planthopper, alters resource allocation and inhibits gas exchange in grapevines3
Cultivated sunflower (Helianthus annuus L.) has lower tolerance of moderate drought stress than its con‐specific wild relative, but the underlying traits remain elusive3
Integrated Metabolomics, Transcriptomics, and Ultrastructural Assessment of the Myco‐Heterotrophic Plant, Monotropa uniflora 3
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α‐Tomatine gradient across artificial roots recreates the recruitment of tomato root‐associated Sphingobium3
Identification and preliminary characterization of conserved uncharacterized proteins from Chlamydomonas reinhardtii, Arabidopsis thaliana, and Setaria viri3
PLDC‐Net: A Domain‐Specific Base Model for Plant Leaf Disease Classification Domain Adaptation Tasks3
Metabolic network changes during skotomorphogenesis in Arabidopsis thaliana mutant (atdfb‐3)3
Genome‐Wide Analysis of the APETALA2/Ethylene‐Responsive Factor Gene Family in Carthamus tinctorius L.3
Cycling DOF factor mediated seasonal regulation of sexual reproduction and cold response is not conserved in Physcomitrium patens3
Identification of BAHD acyltransferases associated with acylinositol biosynthesis in Solanum quitoense 3
A Potential Role for MYB93 Regulating Sulfur Responses in Arabidopsis and Tomato3
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Rating pome fruit quality traits using deep learning and image processing3
Sensitivity to Photoperiod Is a Complex Trait in Camelina sativa3
Arabidopsis SPA2 represses seedling de‐etiolation under multiple light conditions3
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Project ChemicalBlooms: Collaborating with citizen scientists to survey the chemical diversity and phylogenetic distribution of plant epicuticular wax blooms3
Differential expansion and retention patterns of LRR‐RLK genes across plant evolution2
Membranous Interacting Partners of Phage‐Type Plastid RNA Polymerase Have Limited Impact on Plastid Gene Expression During Chloroplast Development2
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ALPHA: A High Throughput System for Quantifying Growth in Aquatic Plants2
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Targeting dCas9‐SunTag to a Susceptibility Gene Promoter Is Sufficient for CRISPR Interference2
DNA barcoding of terrestrial invasive plant species in Southwest Michigan2
Genome‐Wide Identification of MYB Genes and Analysis of Their Expression Under Cold Stress Conditions in Artocarpus heterophyllus 2
The Q‐Warg Pipeline: A Robust and Versatile Workflow for Quantitative Analysis of Protoplast Culture Conditions2
Investigating a role for PUB17 and PUB16 in the self‐incompatibility signaling pathway in transgenic Arabidopsis thaliana2
Analysis of the Genetic Diversity of Houttuynia cordata Thunb Germplasm and Associated Variations in Lead Content2
Creating saponin‐free yellow pea seeds by CRISPR/Cas9‐enabled mutagenesis on β‐amyrin synthase2
The maize striate leaves2 (sr2) gene encodes a conserved DUF3732 domain and is homologous to the rice yss1 gene2
The impact of xylan on the biosynthesis and structure of extracellular lignin produced by a Norway spruce tissue culture2
SNRK3.15 Is a Crucial Component of the Sulfur Deprivation Response in Arabidopsis thaliana 2
Maize resistance to insect herbivory is enhanced by silencing expression of genes for jasmonate‐isoleucine degradation using sugarcane mosaic virus2
Plant height shapes hydraulic architecture but does not predict metaxylem area under drought in Sorghum bicolor2
Genome‐wide identification and expression analysis of Na+/H+antiporter (NHX) genes in tomato under salt stress2
PELOTA and HBS1 suppress co‐translational messenger RNA decay in Arabidopsis2
Chromosome‐scale genome assembly of Poa trivialis and population genomics reveal widespread gene flow in a cool‐season grass seed production system2
Removing systemic barriers to equity, diversity, and inclusion: Report of the 2019 Plant Science Research Network workshop “Inclusivity in the Plant Sciences”2
A Periodic 4‐h Extension of the Dark Period Did Not Cause Long‐Term Changes in the Circadian Regulation of Photosynthesis and Sugar Levels in Lettuces2
The brassinosteroid‐responsive protein OCTOPUS is a novel regulator of Arabidopsis thaliana immune signaling2
Genome‐wide association studies identify putative pleiotropic locus mediating drought tolerance in sorghum2
The activation of Chlamydomonas reinhardtii alpha amylase 2 by glutamine requires its N‐terminal aspartate kinase–chorismate mutase–tyrA (ACT) domain2
Arabidopsis‐expressing lysine‐null SUMO1 reveals a non‐essential role for secondary SUMO modifications in plants2
Exploring the role of grafting in abiotic stress management: Contemporary insights and automation trends2
The long road of functional recruitment—The evolution of a gene duplicate to pyrrolizidine alkaloid biosynthesis in the morning glories (Convolvulaceae)2
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RNA‐Binding Proteome‐Wide Analysis Reveals Rice RNA‐Binding Proteins Enriched After Sobemovirus Rice Yellow Mottle Virus Infection2
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Mutations in Components of the TREX‐2 Complex Result in Misexpression of the Kelch‐Domain F‐Box Protein KFB39 Promoter in Arabidopsis thaliana 2
The Arabidopsis Mutant of the Small Intrinsically Disordered Protein DSS1(V) Exhibits Increased Sensitivity to Drought Stress2
A Reference‐Free Algorithm Discovers Regulation in the Plant Transcriptome2
Comparative Proteomic Analysis of Self‐Compatible Turnera Mutants Suggests Glutathione S‐Transferase 8 Is 2
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Crystal structure of Arabidopsis DWARF14‐LIKE2 (DLK2) reveals a distinct substrate binding pocket architecture2
Exploring the diversity of galls on Artemisia indica induced by Rhopalomyia species through morphological and transcriptome analyses2
Topping and grafting affect the alkaloid content and gene expression patterns of tobacco (Nicotiana tabacumL.)2
Proanthocyanidin biosynthesis in the developing wheat seed coat investigated by chemical and RNA‐Seq analysis2
Wheat NAC transcription factor NAC5‐1 is a positive regulator of senescence2
Characterization of promoter elements of isoprene‐responsive genes and the ability of isoprene to bind START domain transcription factors2
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