Life Science Alliance

Papers
(The TQCC of Life Science Alliance is 7. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-05-01 to 2024-05-01.)
ArticleCitations
TMPRSS2 and furin are both essential for proteolytic activation of SARS-CoV-2 in human airway cells554
A FIJI macro for quantifying pattern in extracellular matrix79
Exosome-mediated delivery of CRISPR/Cas9 for targeting of oncogenic KrasG12D in pancreatic cancer78
USP30 sets a trigger threshold for PINK1–PARKIN amplification of mitochondrial ubiquitylation71
Evaluating CRISPR-based prime editing for cancer modeling and CFTR repair in organoids70
Pancreatic cancer is marked by complement-high blood monocytes and tumor-associated macrophages64
1,6-hexanediol rapidly immobilizes and condenses chromatin in living human cells63
A serum proteome signature to predict mortality in severe COVID-19 patients62
Profiling of immune dysfunction in COVID-19 patients allows early prediction of disease progression51
SARS-CoV-2 infection induces protective immunity and limits transmission in Syrian hamsters48
Genome-wide R-loop analysis defines unique roles for DDX5, XRN2, and PRMT5 in DNA/RNA hybrid resolution43
An extended DNA-free intranuclear compartment organizes centrosome microtubules in malaria parasites41
High levels of TFAM repress mammalian mitochondrial DNA transcription in vivo39
GATA transcription factors, SOX17 and TFAP2C, drive the human germ-cell specification program38
MIC26 and MIC27 cooperate to regulate cardiolipin levels and the landscape of OXPHOS complexes37
An atlas of human proximal epididymis reveals cell-specific functions and distinct roles for CFTR37
Structural comparison of GLUT1 to GLUT3 reveal transport regulation mechanism in sugar porter family34
ER targeting of non-imported mitochondrial carrier proteins is dependent on the GET pathway33
Gut microbiota–derived short-chain fatty acids protect against the progression of endometriosis33
FIREWORKS: a bottom-up approach to integrative coessentiality network analysis32
Proteomics characterisation of the L929 cell supernatant and its role in BMDM differentiation32
LRRK2-phosphorylated Rab10 sequesters Myosin Va with RILPL2 during ciliogenesis blockade29
Quantification of cristae architecture reveals time-dependent characteristics of individual mitochondria29
CellMixS: quantifying and visualizing batch effects in single-cell RNA-seq data28
The DREAM complex represses growth in response to DNA damage in Arabidopsis27
Concordance of MERFISH spatial transcriptomics with bulk and single-cell RNA sequencing27
MAPK pathway mutations in head and neck cancer affect immune microenvironments and ErbB3 signaling27
Myocardial infarction affects Cx43 content of extracellular vesicles secreted by cardiomyocytes26
Nucleotide biosynthesis links glutathione metabolism to ferroptosis sensitivity26
Lipid-associated PML structures assemble nuclear lipid droplets containing CCTα and Lipin126
PROSER1 mediates TET2 O-GlcNAcylation to regulate DNA demethylation on UTX-dependent enhancers and CpG islands25
Differential regulation of hepatic physiology and injury by the TAM receptors Axl and Mer25
Prognostic accuracy of MALDI-TOF mass spectrometric analysis of plasma in COVID-1925
Leishmania-infected macrophages release extracellular vesicles that can promote lesion development25
Mapping the micro-proteome of the nuclear lamina and lamina-associated domains25
The bacterial quorum sensing signal DSF hijacks Arabidopsis thaliana sterol biosynthesis to suppress plant innate immunity25
Comparative profiling of stress granule clearance reveals differential contributions of the ubiquitin system25
Preclinical and randomized phase I studies of plitidepsin in adults hospitalized with COVID-1924
multicrispr: gRNA design for prime editing and parallel targeting of thousands of targets24
Elevation in sphingolipid upon SARS-CoV-2 infection: possible implications for COVID-19 pathology24
mRNA COVID-19 vaccine booster fosters B- and T-cell responses in immunocompromised patients24
STAG1 vulnerabilities for exploiting cohesin synthetic lethality in STAG2-deficient cancers23
EBV renders B cells susceptible to HIV-1 in humanized mice23
Polycomb mutant partially suppresses DNA hypomethylation–associated phenotypes in Arabidopsis23
Multiple sclerosis risk variants regulate gene expression in innate and adaptive immune cells23
Microfluidic characterisation reveals broad range of SARS-CoV-2 antibody affinity in human plasma23
Fungal mycelia and bacterial thiamine establish a mutualistic growth mechanism23
Snail augments fatty acid oxidation by suppression of mitochondrial ACC2 during cancer progression23
Structure of human Dispatched-1 provides insights into Hedgehog ligand biogenesis23
Cancer-associated cells release citrate to support tumour metastatic progression21
Benchmarking a highly selective USP30 inhibitor for enhancement of mitophagy and pexophagy21
An evolutionary approach to systematic discovery of novel deubiquitinases, applied to Legionella21
SARS-CoV-2 spike E156G/Δ157-158 mutations contribute to increased infectivity and immune escape21
CryoEM structure ofDrosophilaflight muscle thick filaments at 7 Å resolution20
Cyclin A2 localises in the cytoplasm at the S/G2 transition to activate PLK120
Exploiting somatic piRNAs in Bemisia tabaci enables novel gene silencing through RNA feeding20
NF-κB inhibition in keratinocytes causes RIPK1-mediated necroptosis and skin inflammation20
Obesity-induced senescent macrophages activate a fibrotic transcriptional program in adipocyte progenitors20
Decreasing pdzd8-mediated mito–ER contacts improves organismal fitness and mitigates Aβ42toxicity20
HTR6 and SSTR3 ciliary targeting relies on both IC3 loops and C-terminal tails20
TrkB signaling regulates the cold-shock protein RBM3-mediated neuroprotection20
Structural basis of HapEP88L-linked antifungal triazole resistance in Aspergillus fumigatus19
Multiplexed chemogenetics in astrocytes and motoneurons restore blood–spinal cord barrier in ALS19
STAT3 in tumor fibroblasts promotes an immunosuppressive microenvironment in pancreatic cancer19
Generation of human long-lived plasma cells by developmentally regulated epigenetic imprinting19
The chromatin landscape of primary synovial sarcoma organoids is linked to specific epigenetic mechanisms and dependencies19
Notch1 signaling determines the plasticity and function of fibroblasts in diabetic wounds18
Quantitative analysis of nuclear pore complex organization in Schizosaccharomyces pombe18
Dendritic cells maintain anti-tumor immunity by positioning CD8 skin-resident memory T cells18
RNA exosome mutations in pontocerebellar hypoplasia alter ribosome biogenesis and p53 levels18
Microglia show differential transcriptomic response to Aβ peptide aggregates ex vivo and in vivo18
Attenuation of cGAS/STING activity during mitosis18
Redundant roles of EGFR ligands in the ERK activation waves during collective cell migration18
Human BRCA pathogenic variants were originated during recent human history18
DDX5 promotes oncogene C3 and FABP1 expressions and drives intestinal inflammation and tumorigenesis18
Aberrant autophagosome formation occurs upon small molecule inhibition of ULK1 kinase activity18
Gene selection for optimal prediction of cell position in tissues from single-cell transcriptomics data18
Role of opioid signaling in kidney damage during the development of salt-induced hypertension18
Spastin recovery in hereditary spastic paraplegia by preventing neddylation-dependent degradation18
Arterial stiffness and cardiac dysfunction in Hutchinson–Gilford Progeria Syndrome corrected by inhibition of lysyl oxidase18
Serine palmitoyltransferase assembles at ER–mitochondria contact sites17
Chromosome length and gene density contribute to micronuclear membrane stability17
The different activities of RNA G-quadruplex structures are controlled by flanking sequences17
Measuring cystic fibrosis drug responses in organoids derived from 2D differentiated nasal epithelia17
ScRNA-seq expression ofIFI27andAPOC2identifies four alveolar macrophage superclusters in healthy BALF17
Dendritic cell entry to lymphatic capillaries is orchestrated by CD44 and the hyaluronan glycocalyx17
Single-cell RNA sequencing of mouse islets exposed to proinflammatory cytokines17
RNA polymerase backtracking results in the accumulation of fission yeast condensin at active genes16
Structural basis of nucleosomal histone H4 lysine 20 methylation by SET8 methyltransferase16
Glucocorticoid signaling induces transcriptional memory and universally reversible chromatin changes16
TMBIM5 loss of function alters mitochondrial matrix ion homeostasis and causes a skeletal myopathy16
The Paf1 complex positively regulates enhancer activity in mouse embryonic stem cells16
Vaccinia virus hijacks ESCRT-mediated multivesicular body formation for virus egress16
Electron cryo-tomography structure of axonemal doublet microtubule from Tetrahymena thermophila16
Paralogous synthetic lethality underlies genetic dependencies of the cancer-mutated gene STAG216
Dynamic closed states of a ligand-gated ion channel captured by cryo-EM and simulations16
Age-related differences in immune dynamics during SARS-CoV-2 infection in rhesus macaques16
Islet Gene View—a tool to facilitate islet research16
Profiles of telomeric repeats in Insecta reveal diverse forms of telomeric motifs in Hymenopterans16
The RNA-binding profile of the splicing factor SRSF6 in immortalized human pancreatic β-cells15
Incomplete antiviral treatment may induce longer durations of viral shedding during SARS-CoV-2 infection15
Linear ubiquitination induces NEMO phase separation to activate NF-κB signaling15
In vivo CRISPR/Cas9 knockout screen: TCEAL1 silencing enhances docetaxel efficacy in prostate cancer15
Autoimmune anti-DNA and anti-phosphatidylserine antibodies predict development of severe COVID-1915
Pancreatic cancer triggers diabetes through TGF-β–mediated selective depletion of islet β-cells15
Different mutant RUNX1 oncoproteins program alternate haematopoietic differentiation trajectories15
Sensitive visualization of SARS-CoV-2 RNA with CoronaFISH15
Reduced RNA turnover as a driver of cellular senescence15
Thymosin α1 protects from CTLA-4 intestinal immunopathology15
Meflin-positive cancer-associated fibroblasts enhance tumor response to immune checkpoint blockade15
Regulation of axonal morphogenesis by the mitochondrial protein Efhd115
Meningeal lymphoid structures are activated under acute and chronic spinal cord pathologies15
Loss of polycystins suppresses deciliation via the activation of the centrosomal integrity pathway15
Nonsense-mediated mRNA decay uses complementary mechanisms to suppress mRNA and protein accumulation15
Interplay between MPIase, YidC, and PMF during Sec-independent insertion of membrane proteins15
Inhibiting the reproduction of SARS-CoV-2 through perturbations in human lung cell metabolic network14
Engineered RNA biosensors enable ultrasensitive SARS-CoV-2 detection in a simple color and luminescence assay14
Elevated glycolysis imparts functional ability to CD8+ T cells in HIV infection14
Integrated human/SARS-CoV-2 metabolic models present novel treatment strategies against COVID-1914
Insulin signaling mediates neurodegeneration in glioma14
Replicated chromatin curtails 53BP1 recruitment in BRCA1-proficient and BRCA1-deficient cells14
Scratch-induced partial skin wounds re-epithelialize by sheets of independently migrating keratinocytes14
Structure of avian influenza hemagglutinin in complex with a small molecule entry inhibitor14
Extracellular matrix mediates moruloid-blastuloid morphodynamics in malignant ovarian spheroids14
Increased exosome secretion in neurons aging in vitro by NPC1-mediated endosomal cholesterol buildup14
Human G-MDSCs are neutrophils at distinct maturation stages promoting tumor growth in breast cancer14
Long noncoding RNA HOTAIR interacts with Y-Box Protein-1 (YBX1) to regulate cell proliferation14
Implications for tetraspanin-enriched microdomain assembly based on structures of CD9 with EWI-F14
Elevated glucose increases genomic instability by inhibiting nucleotide excision repair14
Activation of mitochondrial unfolded protein response protects against multiple exogenous stressors13
The actin regulator profilin 1 is functionally associated with the mammalian centrosome13
Identification and characterization of distinct brown adipocyte subtypes in C57BL/6J mice13
Structure of the helicase core of Werner helicase, a key target in microsatellite instability cancers13
Wnt10b-GSK3β–dependent Wnt/STOP signaling prevents aneuploidy in human somatic cells13
IL-13 deficiency exacerbates lung damage and impairs epithelial-derived type 2 molecules during nematode infection13
Distinct mechanisms mediate X chromosome dosage compensation in Anopheles and Drosophila13
Adipose tissue–specific ablation of Ces1d causes metabolic dysregulation in mice13
Human milk inhibits some enveloped virus infections, including SARS-CoV-2, in an intestinal model13
Fast but not furious: a streamlined selection method for genome-edited cells13
CryoEM of endogenous mammalian V-ATPase interacting with the TLDc protein mEAK-713
CNKSR1 serves as a scaffold to activate an EGFR phosphatase via exclusive interaction with RhoB-GTP13
Reduced replication but increased interferon resistance of SARS-CoV-2 Omicron BA.113
Mitochondrial spongiotic brain disease: astrocytic stress and harmful rapamycin and ketosis effect13
Tanshinone functions as a coenzyme that confers gain of function of NQO1 to suppress ferroptosis12
Intestinal single-cell atlas reveals novel lymphocytes in pigs with similarities to human cells12
Identification of human gene research articles with wrongly identified nucleotide sequences12
Mitochondrial Aurora kinase A induces mitophagy by interacting with MAP1LC3 and Prohibitin 212
BRD2 regulation of sigma-2 receptor upon cholesterol deprivation12
SCFCdc4ubiquitin ligase regulates synaptonemal complex formation during meiosis12
Multifaceted regulation of hepatic lipid metabolism by YY112
Specific N-cadherin–dependent pathways drive human breast cancer dormancy in bone marrow12
The transcriptional landscape analysis of basal cell carcinomas reveals novel signalling pathways and actionable targets12
Concomitant gain and loss of function pathomechanisms in C9ORF72 amyotrophic lateral sclerosis11
Gene-selective transcription promotes the inhibition of tissue reparative macrophages by TNF11
Cell-free expression of the outer membrane protein OprF of Pseudomonas aeruginosa for vaccine purposes11
The L-NAME mouse model of preeclampsia and impact to long-term maternal cardiovascular health11
Up-regulation of ubiquitin–proteasome activity upon loss of NatA-dependent N-terminal acetylation11
Human IFITM3 restricts chikungunya virus and Mayaro virus infection and is susceptible to virus-mediated counteraction11
Inhibition of a transcriptional repressor rescues hearing in a splicing factor–deficient mouse11
A paralog-specific role of COPI vesicles in the neuronal differentiation of mouse pluripotent cells11
Plasmodium SAS4: basal body component of male cell which is dispensable for parasite transmission11
Cell-autonomousToxoplasmakilling program requires Irgm2 but not its microbe vacuolar localization11
Biallelic ADPRHL2 mutations in complex neuropathy affect ADP ribosylation and DNA damage response11
MicroRNA regulation of murine trophoblast stem cell self-renewal and differentiation11
Amyloid-like aggregating proteins cause lysosomal defects in neurons via gain-of-function toxicity11
Bis-choline tetrathiomolybdate prevents copper-induced blood–brain barrier damage11
Harnessing reaction-based probes to preferentially target pancreatic β-cells and β-like cells11
Heparan sulfate proteoglycans mediate prion-like α-synuclein toxicity in Parkinson’s in vivo models11
A novel role of DNA polymerase λ in translesion synthesis in conjunction with DNA polymerase ζ11
Ribosomal protein L5 facilitates rDNA-bundled condensate and nucleolar assembly11
Phylogenetic profiling resolves early emergence of PRC2 and illuminates its functional core10
Fluorescent tracking identifies key migratory dendritic cells in the lymph node after radiotherapy10
Tradeoff between metabolic i-proteasome addiction and immune evasion in triple-negative breast cancer10
The mechanosensitive ion channel PIEZO1 promotes satellite cell function in muscle regeneration10
PGE2accounts for bidirectional changes in alveolar macrophage self-renewal with aging and smoking10
miR-486 is essential for muscle function and suppresses a dystrophic transcriptome10
MMD-associated RNF213 SNPs encode dominant-negative alleles that globally impair ubiquitylation10
A novel canis lupus familiaris reference genome improves variant resolution for use in breed-specific GWAS10
Tricalbin proteins regulate plasma membrane phospholipid homeostasis10
Origin and segregation of the human germline10
Unbiased yeast screens identify cellular pathways affected in Niemann–Pick disease type C10
BH4 activates CaMKK2 and rescues the cardiomyopathic phenotype in rodent models of diabetes10
The m6A(m)-independent role of FTO in regulating WNT signaling pathways10
Incipient sympatric speciation in wild barley caused by geological-edaphic divergence10
A multifaceted role of progranulin in regulating amyloid-beta dynamics and responses10
NovelDNM1Lvariants impair mitochondrial dynamics through divergent mechanisms10
Gradual compaction of the central spindle decreases its dynamicity in PRC1 and EB1 gene-edited cells10
SnRNA sequencing defines signaling by RBC-derived extracellular vesicles in the murine heart10
Peptide-based quorum sensing systems in Paenibacillus polymyxa10
Structure and conformational dynamics of Clostridioides difficile toxin A10
The HDL particle composition determines its antitumor activity in pancreatic cancer10
TrkA-mediated endocytosis of p75-CTF prevents cholinergic neuron death upon γ-secretase inhibition10
Phenylbutyrate rescues the transport defect of the Sec61α mutations V67G and T185A for renin10
Exosomes/microvesicles target SARS-CoV-2 via innate and RNA-induced immunity with PIWI-piRNA system10
Artemisinin-independent inhibitory activity of Artemisia sp. infusions against different Plasmodium stages including relapse-causing hypnozoites10
ATAD2 controls chromatin-bound HIRA turnover9
Transcriptomics reveals immune-metabolism disorder in acute-on-chronic liver failure in rats9
β-arrestin1 promotes tauopathy by transducing GPCR signaling, disrupting microtubules and autophagy9
Topical TMPRSS2 inhibition prevents SARS-CoV-2 infection in differentiated human airway cultures9
Short-term IL-15 priming leaves a long-lasting signalling imprint in mouse NK cells independently of a metabolic switch9
Muscarinic receptor M3 contributes to intestinal stem cell maintenance via EphB/ephrin-B signaling9
Resolution of the curse of dimensionality in single-cell RNA sequencing data analysis9
Bimodal fibrosis in a novel mouse model of bleomycin-induced usual interstitial pneumonia9
Profiles of histidine-rich glycoprotein associate with age and risk of all-cause mortality9
TGFβ-induced expression of long noncoding lincRNA Platr18 controls breast cancer axonogenesis9
UVB mutagenesis differs in Nras- and Braf-mutant mouse models of melanoma9
AGO1 regulates pericentromeric regions in mouse embryonic stem cells9
Phylo-geo-network and haplogroup analysis of 611 novel coronavirus (SARS-CoV-2) genomes from India9
TPC2 promotes choroidal angiogenesis and inflammation in a mouse model of neovascular age-related macular degeneration9
Hyperactive immature state and differential CXCR2 expression of neutrophils in severe COVID-199
Growth-rate-dependent and nutrient-specific gene expression resource allocation in fission yeast9
Leishmania survives by exporting miR-146a from infected to resident cells to subjugate inflammation9
The structure and flexibility analysis of the Arabidopsis synaptotagmin 1 reveal the basis of its regulation at membrane contact sites9
Translatome profiling in fatal familial insomnia implicates TOR signaling in somatostatin neurons9
Peroxisomes contribute to intracellular calcium dynamics in cardiomyocytes and non-excitable cells9
Gain-of-function genetic screens in human cells identify SLC transporters overcoming environmental nutrient restrictions9
ERK-Smurf1-RhoA signaling is critical for TGFβ-drived EMT and tumor metastasis9
Proteostasis in dendritic cells is controlled by the PERK signaling axis independently of ATF49
Stress-induced tyrosine phosphorylation of RtcB modulates IRE1 activity and signaling outputs8
Expression regulation of genes is linked to their CpG density distributions around transcription start sites8
Urinary prostaglandin E2 as a biomarker for recurrent UTI in postmenopausal women8
LRR-protein RNH1 dampens the inflammasome activation and is associated with COVID-19 severity8
Non-canonical activation of the ER stress sensor ATF6 by Legionella pneumophila effectors8
Expression of immunoglobulin constant domain genes in neurons of the mouse central nervous system8
Nuclear ingression of cytoplasmic bodies accompanies a boost in autophagy8
SustainedHelicobacter pyloriinfection accelerates gastric dysplasia in a mouse model8
Mps2 links Csm4 and Mps3 to form a telomere-associated LINC complex in budding yeast8
Semaphorin 6D–expressing mesenchymal cells regulate IL-10 production by ILC2s in the lung8
Stepwise transmigration of T- and B cells through a perivascular channel in high endothelial venules8
CDCP1 promotes compensatory renal growth by integrating Src and Met signaling8
Biochemical and functional characterization of a meiosis-specific Pch2/ORC AAA+ assembly8
Modulation of Aub–TDRD interactions elucidates piRNA amplification and germplasm formation8
HIV-1 infection enhances innate function and TLR7 expression in female plasmacytoid dendritic cells8
Structure-based design and characterization of Parkin-activating mutations8
Caspase-4 dimerisation and D289 auto-processing elicit an interleukin-1β-converting enzyme8
Quantitative profiling of adaptation to cyclin E overproduction8
ERK2 MAP kinase regulates SUFU binding by multisite phosphorylation of GLI18
MET∆14 promotes a ligand-dependent, AKT-driven invasive growth8
Hierarchy of TGFβ/SMAD, Hippo/YAP/TAZ, and Wnt/β-catenin signaling in melanoma phenotype switching8
Set4 regulates stress response genes and coordinates histone deacetylases within yeast subtelomeres8
A conserved PI(4,5)P2–binding domain is critical for immune regulatory function of DOCK88
Macrophages-induced IL-18–mediated eosinophilia promotes characteristics of pancreatic malignancy8
Existence of log-phase Escherichia coli persisters and lasting memory of a starvation pulse8
A time-resolved interaction analysis of Bem1 reconstructs the flow of Cdc42 during polar growth8
DUSP4 protects BRAF- and NRAS-mutant melanoma from oncogene overdose through modulation of MITF8
Myc controls NK cell development, IL-15-driven expansion, and translational machinery7
Modulating HSF1 levels impacts expression of the estrogen receptor α and antiestrogen response7
KIF13B-mediated VEGFR2 trafficking is essential for vascular leakage and metastasis in vivo7
De novo discovery of traits co-occurring with chronic obstructive pulmonary disease7
Proteomic landscape of SARS-CoV-2– and MERS-CoV–infected primary human renal epithelial cells7
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